Abstract

The spinal dorsal horn harbors a sophisticated and heterogeneous network of excitatory and inhibitory neurons that process peripheral signals encoding different sensory modalities. Although it has long been recognized that this network is crucial both for the separation and the integration of sensory signals of different modalities, a systematic unbiased approach to the use of specific neuromodulatory systems is still missing. Here, we have used the translating ribosome affinity purification (TRAP) technique to map the translatomes of excitatory glutamatergic (vGluT2+) and inhibitory GABA and/or glycinergic (vGAT+ or Gad67+) neurons of the mouse spinal cord. Our analyses demonstrate that inhibitory and excitatory neurons are not only set apart, as expected, by the expression of genes related to the production, release or re-uptake of their principal neurotransmitters and by genes encoding for transcription factors, but also by a differential engagement of neuromodulator, especially neuropeptide, signaling pathways. Subsequent multiplex in situ hybridization revealed eleven neuropeptide genes that are strongly enriched in excitatory dorsal horn neurons and display largely non-overlapping expression patterns closely adhering to the laminar and presumably also functional organization of the spinal cord grey matter.

Highlights

  • To further validate the three bacTRAP lines we isolated the mRNA bound to the eGFP-L10a tagged ribosomes from each line and analyzed the enrichment of selected marker genes in the polysome pull down fraction versus the input using qPCR

  • When comparing the pull down fraction versus the input fraction isolated from the vGluT2::bacTRAP line we found an enrichment of transcripts encoding excitatory markers (Lmx1b and vGluT2) and a depletion of the transcripts encoding for inhibitory markers (Fig. 1O)

  • Pathway and Gene Ontology analyses of the translatomes of these two populations revealed that subtypes of neurotransmitter receptors and of down-stream signalling cascades differ between excitatory and inhibitory neurons and that the heterogeneity within the large population of excitatory dorsal horn neurons and their lamina organization is impressively mirrored by the expression of 11 neuropeptides or neuropeptide precursors

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Summary

Objectives

Software PurposeZeiss Axio Scan.Z1 slidescanner5×/0.25 Fluar air 10×/0.45 Plan-Apochromat air ZEN 2 slidescan (blue edition)Bright field images of chromogenic ISHsZeiss LSM710 confocal microscope20×/0.8 Plan‐Apochromat air 40×/1.3 EC Plan‐Neofluar oil ZEN 2011 (black edition)Fluorescent images for mouse line validationZeiss LSM700 confocal microscope25×/0.8 Plan‐Neofluar oil 40x/1.4 LCI Plan-Apochromat oilZen 2011 (black edition). 5×/0.25 Fluar air 10×/0.45 Plan-Apochromat air ZEN 2 slidescan (blue edition). Bright field images of chromogenic ISHs. 20×/0.8 Plan‐Apochromat air 40×/1.3 EC Plan‐Neofluar oil ZEN 2011 (black edition). 25×/0.8 Plan‐Neofluar oil 40x/1.4 LCI Plan-Apochromat oil

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