Abstract

Neurogranin (Ng) is a member of the IQ motif class of calmodulin (CaM)-binding proteins, and interactions with CaM are its only known biological function. In this report we demonstrate that the binding affinity of Ng for CaM is weakened by Ca(2+) but to a lesser extent (2-3-fold) than that previously suggested from qualitative observations. We also show that Ng induced a >10-fold decrease in the affinity of Ca(2+) binding to the C-terminal domain of CaM with an associated increase in the Ca(2+) dissociation rate. We also discovered a modest, but potentially important, increase in the cooperativity in Ca(2+) binding to the C-lobe of CaM in the presence of Ng, thus sharpening the threshold for the C-domain to become Ca(2+)-saturated. Domain mapping using synthetic peptides indicated that the IQ motif of Ng is a poor mimetic of the intact protein and that the acidic sequence just N-terminal to the IQ motif plays an important role in reproducing Ng-mediated decreases in the Ca(2+) binding affinity of CaM. Using NMR, full-length Ng was shown to make contacts largely with residues in the C-domain of CaM, although contacts were also detected in residues in the N-terminal domain. Together, our results can be consolidated into a model where Ng contacts residues in the N- and C-lobes of both apo- and Ca(2+)-bound CaM and that although Ca(2+) binding weakens Ng interactions with CaM, the most dramatic biochemical effect is the impact of Ng on Ca(2+) binding to the C-terminal lobe of CaM.

Highlights

  • Neurogranin is an IQ motif protein that binds to both apo- and calcium-saturated calmodulin

  • Domain mapping using synthetic peptides indicated that the IQ motif of Ng is a poor mimetic of the intact protein and that the acidic sequence just N-terminal to the IQ motif plays an important role in reproducing Ng-mediated decreases in the Ca2؉ binding affinity of CaM

  • We showed previously that PEP-19 has little effect on the affinity of Ca2ϩ binding to CaM, but it increases both the kon and koff for Ca2ϩ binding to its C-domain by 40 –50-fold [14]

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Summary

Introduction

Neurogranin is an IQ motif protein that binds to both apo- and calcium-saturated calmodulin. Results: Neurogranin makes contacts with both the N- and C-domains of calmodulin that functionally leads to altered calcium binding kinetics. We show that Ng induced a >10-fold decrease in the affinity of Ca2؉ binding to the C-terminal domain of CaM with an associated increase in the Ca2؉ dissociation rate. We discovered a modest, but potentially important, increase in the cooperativity in Ca2؉ binding to the C-lobe of CaM in the presence of Ng, sharpening the threshold for the C-domain to become Ca2؉-saturated. Domain mapping using synthetic peptides indicated that the IQ motif of Ng is a poor mimetic of the intact protein and that the acidic sequence just N-terminal to the IQ motif plays an important role in reproducing Ng-mediated decreases in the Ca2؉ binding affinity of CaM. Our results can be consolidated into a model where Ng contacts residues in the N- and C-lobes of both apo- and Ca2؉-bound CaM and that Ca2؉ binding weakens Ng interactions with CaM, the most dramatic biochemical effect is the impact of Ng on Ca2؉ binding to the C-terminal lobe of CaM

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