Abstract

The Zika virus (ZIKV) is a mosquito-borne Flavivirus and can be transmitted through an infected mosquito bite or through human-to-human interaction by sexual activity, blood transfusion, breastfeeding, or perinatal exposure. After the 2015–2016 outbreak in Brazil, a strong link between ZIKV infection and microcephaly emerged. ZIKV specifically targets human neural progenitor cells, suggesting that proteins encoded by ZIKV bind and inactivate host cell proteins, leading to microcephaly. Here, we present a systematic annotation of interactions between human proteins and the seven non-structural ZIKV proteins corresponding to a Brazilian isolate. The interaction network was generated by combining tandem-affinity purification followed by mass spectrometry with yeast two-hybrid screens. We identified 150 human proteins, involved in distinct biological processes, as interactors to ZIKV non-structural proteins. Our interacting network is composed of proteins that have been previously associated with microcephaly in human genetic disorders and/or animal models. Further, we show that the protein inhibitor of activated STAT1 (PIAS1) interacts with NS5 and modulates its stability. This study builds on previously published interacting networks of ZIKV and genes related to autosomal recessive primary microcephaly to generate a catalog of human cellular targets of ZIKV proteins implicated in processes related to microcephaly in humans. Collectively, these data can be used as a resource for future characterization of ZIKV infection biology and help create a basis for the discovery of drugs that may disrupt the interaction and reduce the health damage to the fetus.

Highlights

  • Zika virus (ZIKV) is a neurotropic arthropod-borne virus belonging to Flaviviridae family, along with other Flaviviruses capable of infecting central nervous system, such as West Nile Virus, St

  • ZIKV infection was correlated with congenital microcephaly in newborns and

  • ZIKV infection was correlated with congenital microcephaly in newborns and with with other neurological conditions in adults [4,5,6,7,10,11,12]

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Summary

Introduction

Zika virus (ZIKV) is a neurotropic arthropod-borne virus belonging to Flaviviridae family, along with other Flaviviruses capable of infecting central nervous system, such as West Nile Virus, St. The Brazilian outbreak was the first time that ZIKV infection (presented in pregnant women) was correlated to congenital microcephaly in newborns [8,9] Both in vitro and in vivo models have demonstrated that ZIKV has a tropism toward human neural progenitor cells [10,11,12]. We present a network composed of proteins related to neuron projection development, microcephaly-associated disorders, and by protein complexes linked to replication and infection of other members of the Flaviviridae family. We show a PIAS1-dependent control of NS5 protein stability Taken together, these data can be used as a resource to improve the understanding of the ZIKV pathogenesis and identify putative pharmacological targets for future treatment approaches

Materials and Methods
Y2H Library Screening
Validation of Y2H Interactions
Tandem Affinity Purification Coupled to Mass Spectrometry
Analysis of Proteomics Data
Network Generation and GO Analysis
Mitocheck Analysis and Clustering
GST Pulldown Assay
2.10. Protein Stability Assay
Yeast-Two Hybrid Screenings
TAP-MS
Merged ZIKV PIN
Gene Ontology
Phenoclusters
Merged
Integration with Other ZIKV PINs
Integration
PIAS1 Modulates NS5 Protein Stability
Discussion
Full Text
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