Neighbors Map: An efficient atomic descriptor for structural analysis

Abstract

Accurate structural analysis is essential to gain physical knowledge and understanding of atomic-scale processes in materials from atomistic simulations. However, traditional analysis methods often reach their limits when applied to crystalline systems with thermal fluctuations, defect-induced distortions, partial vitrification, etc. In order to enhance the means of structural analysis, we present a novel descriptor for encoding atomic environments into 2D images, based on a pixelated representation of graph-like architecture with weighted edge connections of neighboring atoms. This descriptor is well adapted for Convolutional Neural Networks and enables accurate structural analysis at a low computational cost. In this paper, we showcase a series of applications, including the classification of crystalline structures in distorted systems, tracking phase transformations up to the melting temperature, and analyzing liquid-to-amorphous transitions in pure metals and alloys. This work provides the foundation for robust and efficient structural analysis in materials science, opening up new possibilities for studying complex structural processes, which cannot be described with traditional approaches.