Abstract

ABSTRACTNEDDylation has been shown to participate in the DNA damage pathway, but the substrates of neural precursor cell expressed developmentally downregulated 8 (NEDD8) and the roles of NEDDylation involved in the DNA damage response (DDR) are largely unknown. Translesion synthesis (TLS) is a damage-tolerance mechanism, in which RAD18/RAD6-mediated monoubiquitinated proliferating cell nuclear antigen (PCNA) promotes recruitment of polymerase η (polη) to bypass lesions. Here we identify PCNA as a substrate of NEDD8, and show that E3 ligase RAD18-catalyzed PCNA NEDDylation antagonizes its ubiquitination. In addition, NEDP1 acts as the deNEDDylase of PCNA, and NEDP1 deletion enhances PCNA NEDDylation but reduces its ubiquitination. In response to H2O2 stimulation, NEDP1 disassociates from PCNA and RAD18-dependent PCNA NEDDylation increases markedly after its ubiquitination. Impairment of NEDDylation by Ubc12 knockout enhances PCNA ubiquitination and promotes PCNA-polη interaction, while up-regulation of NEDDylation by NEDD8 overexpression or NEDP1 deletion reduces the excessive accumulation of ubiquitinated PCNA, thus inhibits PCNA-polη interaction and blocks polη foci formation. Moreover, Ubc12 knockout decreases cell sensitivity to H2O2-induced oxidative stress, but NEDP1 deletion aggravates this sensitivity. Collectively, our study elucidates the important role of NEDDylation in the DDR as a modulator of PCNA monoubiquitination and polη recruitment.

Highlights

  • Genome integrity is a basic requirement for cell growth, proliferation, and development

  • The mass spectrum data of neural precursor cell expressed developmentally downregulated 8 (NEDD8) substrates screening in the previous study showed that proliferating cell nuclear antigen (PCNA) might be a substrate of NEDD8 (Xirodimas et al, 2008; Coleman et al, 2017)

  • As PCNA is modified by ubiquitin, small ubiquitin-like modifier (SUMO) and ISG15 (Hoege et al, 2002; Park et al, 2014), we assessed whether PCNA was NEDDylated by NEDD8 using Ni2+ pull-down assay, in which His-tagged NEDD8 was expressed and NEDD8 conjugates were enriched by Ni2+ resin

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Summary

INTRODUCTION

Genome integrity is a basic requirement for cell growth, proliferation, and development. Under different exogenous or endogenous stresses, such as those caused by ionizing radiation, ultraviolet (UV) radiation, DNA-damaging chemical agents, and other oxidative chemicals, genome integrity and cell viability are greatly threatened (Jackson and Durocher, 2013). In response to these stresses, various signaling pathways involved in multiple repair mechanisms are induced, including the DNA damage response (DDR) that recruits a series of proteins to damaged DNA sites and triggers checkpoint signaling or essential repair steps (Hoeijmakers, 2001; Harrison and Haber, 2006; Branzei and Foiani, 2008; Bergink and Jentsch, 2009). In response to hydrogen peroxide (H2O2)-induced oxidative stress, NEDDylation plays a pivotal role in the recruitment of polη by regulating PCNA monoubiquitination

RESULTS
55 Ni-PD PCNA-NEDD8
96 IB: RAD18
55 Ni-PD 34
72 IP 34 72
DISCUSSION
B Normal replication
MATERIALS AND METHODS
COMPLIANCE WITH ETHICS GUIDELINES
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