Abstract

Thermophilic Campylobacter, in particular Campylobacter jejuni, C. coli and C. lari are the main relevant Campylobacter species for human infections. Due to their high capacity of genetic exchange by horizontal gene transfer (HGT), rapid adaptation to changing environmental and host conditions contribute to successful spreading and persistence of these foodborne pathogens. However, extensive HGT can exert dangerous side effects for the bacterium, such as the incorporation of gene fragments leading to disturbed gene functions. Here we discuss mechanisms of HGT, notably natural transformation, conjugation and bacteriophage transduction and limiting regulatory strategies of gene transfer. In particular, we summarize the current knowledge on how the DNA macromolecule is exchanged between single cells. Mechanisms to stimulate and to limit HGT obviously coevolved and maintained an optimal balance. Chromosomal rearrangements and incorporation of harmful mutations are risk factors for survival and can result in drastic loss of fitness. In Campylobacter, the restricted recognition and preferential uptake of free DNA from relatives are mediated by a short methylated DNA pattern and not by a classical DNA uptake sequence as found in other bacteria. A class two CRISPR-Cas system is present but also other DNases and restriction-modification systems appear to be important for Campylobacter genome integrity. Several lytic and integrated bacteriophages have been identified, which contribute to genome diversity. Furthermore, we focus on the impact of gene transfer on the spread of antibiotic resistance genes (resistome) and persistence factors. We discuss remaining open questions in the HGT field, supposed to be answered in the future by current technologies like whole-genome sequencing and single-cell approaches.

Highlights

  • Horizontal gene transfer (HGT) is the exchange of genetic material and plays a major role in genetic diversity of pathogens (Lawrence 2005; Daubin and Szollosi 2016)

  • We address the aspect of barriers to HGT and focus on the clustered regularly interspaces short palindromic repeats (CRISPR)-Cas system and on other nucleases, including restriction–modification systems protecting Campylobacter against incoming foreign DNA

  • Open questions remain of how HGT is regulated in the pathogen, i.e., under which conditions gene transfer is most active and efficient

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Summary

Introduction

Horizontal gene transfer (HGT) is the exchange of genetic material and plays a major role in genetic diversity of pathogens (Lawrence 2005; Daubin and Szollosi 2016). HGT in Campylobacter jejuni is thought to lead to host adaptation and fitness enhancement. There are three types of HGT, natural transformation, conjugation and phage transduction (Fig. 1). Conjugation, is limited to DNA exchange between donor and recipient cells being in physical contact with each other. HGT in Campylobacter is the main driving force for the outstanding genetic diversity of this pathogen (Wilson et al 2009; Sheppard et al 2008). Mechanisms for the regulation of DNA entry and recombination into the bacterial chromosome co-evolved. Other nucleases including restriction–modification systems play an important role for limiting harmful transfer of genetic material into the foodborne pathogen and are discussed in Sect.

Mechanisms of Horizontal Gene Transfer
Methods
Natural Transformation and Uptake of Free DNA
Conjugative Gene Transfer
Phage Transduction and Genomic Rearrangements
Barriers to Horizontal Gene Transfer
CRISPR-Cas and
Methylation-Dependent DNA Recognition
Impact of Gene Transfer on Campylobacter Fitness
Spread of Resistomes and Persistence Factors
Interspecies Gene Transfer
Findings
Concluding Remarks
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