Abstract
Myogenesis involves the stable commitment of progenitor cells followed by the execution of myogenic differentiation, processes that are coordinated by myogenic regulatory factors, microRNAs and BAF chromatin remodeling complexes. BAF60a, BAF60b and BAF60c are structural subunits of the BAF complex that bind to the core ATPase Brg1 to provide functional specificity. BAF60c is essential for myogenesis; however, the mechanisms regulating the subunit composition of BAF/Brg1 complexes, in particular the incorporation of different BAF60 variants, are not understood. Here we reveal their dynamic expression during embryo myogenesis and uncover the concerted negative regulation of BAF60a and BAF60b by the muscle-specific microRNAs (myomiRs) miR-133 and miR-1/206 during somite differentiation. MicroRNA inhibition in chick embryos leads to increased BAF60a or BAF60b levels, a concomitant switch in BAF/Brg1 subunit composition and delayed myogenesis. The phenotypes are mimicked by sustained BAF60a or BAF60b expression and are rescued by morpholino knockdown of BAF60a or BAF60b. This suggests that myomiRs contribute to select BAF60c for incorporation into the Brg1 complex by specifically targeting the alternative variants BAF60a and BAF60b during embryo myogenesis, and reveals that interactions between tissue-specific non-coding RNAs and chromatin remodeling factors confer robustness to mesodermal lineage determination.
Highlights
Myogenesis in vertebrate embryos serves as a paradigm for cell fate commitment
BAF60 variants are dynamically expressed during somite development To examine their role in myogenesis, we investigated the expression of BAF60a, BAF60b and BAF60c transcripts and protein in vivo using chick embryos from Hamburger–Hamilton (HH; Hamburger and Hamilton, 1992) stage 12 to 20 (Fig. 1A-C; supplementary material Fig. S1A,B)
In somites of HH20 embryos, where lineage commitment has begun, the amount of BAF60c protein that co-immunoprecipitated with Brg1 was increased, whereas the amounts of BAF60a and BAF60b variants present in the complex were decreased compared with HH12 (Fig. 1D; supplementary material Fig. S1D), indicating a switch in Brg1/BAF60 subunit composition during somite maturation
Summary
Myogenesis in vertebrate embryos serves as a paradigm for cell fate commitment. The signals leading to the activation of myogenic regulatory factors (MRFs) in vivo, in the myotome of developing somites, are well characterized (Mok and Sweetman, 2011). A hierarchy of transcription factors controls the myogenic program (Bajard et al, 2006; Buckingham and Rigby, 2014). MiRNA-mediated negative regulation of target mRNAs is important for myogenic differentiation of C2C12 myoblasts, and the sustained expression of some miR-1/206 targets results in the activation of non-myogenic programs (Goljanek-Whysall et al, 2012b). MiR-1 and miR-206 have been shown to facilitate myogenic differentiation through negative regulation of the paired-box transcription factor Pax in myogenic progenitor cells (Goljanek-Whysall et al, 2011). This interaction is recapitulated during the activation of adult muscle stem cells (Chen et al, 2010; Hirai et al, 2010)
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