Abstract

Complex I (CI) is the first enzyme of the mitochondrial respiratory chain and couples the electron transfer with proton pumping. Mutations in genes encoding CI subunits can frequently cause inborn metabolic errors. We applied proteome and metabolome profiling of patient-derived cells harboring pathogenic mutations in two distinct CI genes to elucidate underlying pathomechanisms on the molecular level. Our results indicated that the electron transfer within CI was interrupted in both patients by different mechanisms. We showed that the biallelic mutations in NDUFS1 led to a decreased stability of the entire N-module of CI and disrupted the electron transfer between two iron–sulfur clusters. Strikingly interesting and in contrast to the proteome, metabolome profiling illustrated that the pattern of dysregulated metabolites was almost identical in both patients, such as the inhibitory feedback on the TCA cycle and altered glutathione levels, indicative for reactive oxygen species (ROS) stress. Our findings deciphered pathological mechanisms of CI deficiency to better understand inborn metabolic errors.

Highlights

  • Complex I (CI, NADH:ubiquinone oxidoreductase) is the first and largest enzyme of the mitochondrial respiratory chain in humans

  • Phe124 is localized in the fourth transmembrane helix of subunit ND5, which is close to the proposed proton translocation channel [27] and may influence its structure and catalytic function

  • We applied proteome and metabolome profiling to reveal the molecular consequences of gene mutations in NDUFS1 and MT-ND5, which respectively encode for the two core subunits in the hydrophilic and transmembrane arms of CI

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Summary

Introduction

Complex I (CI, NADH:ubiquinone oxidoreductase) is the first and largest enzyme of the mitochondrial respiratory chain in humans. It catalyzes the transfer of electrons from NADH to coenzyme Q10, which is coupled to the translocation of protons from the mitochondrial matrix into the intermembrane space. Mammalian CI consists of 45 subunits, seven of which are encoded by the genes localized in mitochondrial DNA [4,5,6]. CI deficiency can originate from both mitochondrial or nuclear DNA mutations, which leads to its heterogeneous features [7,8].

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