Abstract
The complex quantitative nature of drought-related traits is a major constraint to breed tolerant wheat varieties. Pairs of near-isogenic lines (NILs) with a common genetic background but differing in a particular locus could turn quantitative traits into a Mendelian factor facilitating our understanding of genotype and phenotype interactions. In this study, we report our fast track development and evaluation of NILs from C306 × Dharwar Dry targeting a wheat 4BS QTL hotspot in C306, which confers drought tolerance following the heterogeneous inbreed family (HIF) analysis coupled with immature embryo culture-based fast generation technique. Molecular marker screening and phenotyping for grain yield and related traits under post-anthesis water stress (WS) confirmed four isoline pairs, viz., qDSI.4B.1-2, qDSI.4B.1-3, qDSI.4B.1-6, and qDSI.4B.1-8. There were significant contrasts of responses between the NILs with C306 QTL (+NILs) and the NILs without C306 QTL (−NILs). Among the four confirmed NIL pairs, mean grain yield per plant of the +NILs and −NILs showed significant differences ranging from 9.61 to 10.81 and 6.30 to 7.56 g, respectively, under WS condition, whereas a similar grain yield was recorded between the +NILs and −NILs under well-watered condition. Isolines of +NIL and −NIL pairs showed similar chlorophyll content (SPAD), assimilation rate (A), and transpiration rate (Tr) at the beginning of the stress. However, the +NILs showed significantly higher SPAD (12%), A (66%), stomatal conductance (75%), and Tr (97%) than the −NILs at the seventh day of stress. Quantitative RT-PCR analysis targeting the MYB transcription factor gene Triticum aestivum MYB 82 (TaMYB82), within this genomic region which was retrieved from the wheat reference genome TGACv1, also revealed differential expression in +NILs and –NILs under stress. These results confirmed that the NILs can be invaluable resources for fine mapping of this QTL, and also for cloning and functional characterization of the gene(s) responsible for drought tolerance in wheat.
Highlights
Global wheat production is often hampered by biotic and abiotic stresses like heat, drought, salinity, insects, and diseases
Results indicated that isolines of the near-isogenic lines (NILs) pairs responded variably in terms of physiological parameters when post-anthesis water stress (WS) was applied (Figure 4)
NILs having alleles from the C306 background showed improved performances in terms of grain yield and grain weight. This is because the nearby marker used for screening were tightly linked with the QTL identified for drought tolerance in parent C306, which may harbor some key genes responsible for grain yield and grain weight under post-anthesis stressed condition (Kadam et al, 2012)
Summary
Global wheat production is often hampered by biotic and abiotic stresses like heat, drought, salinity, insects, and diseases. Among those stresses, drought is by far the most detrimental limiting the yield potential of wheat, in rain-fed and limited irrigation environments (Akpinar et al, 2013; Budak et al, 2013). Large genomic intervals associated with those QTLs make them unsuitable for direct use in a breeding program. Characterizing those QTLs and identifying the causal genes, despite large genomic regions of interest, is quite a formidable task. This could be solved by developing near-isogenic lines (NILs) with different flanking markers of the respective QTL
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