Mre11–Rad50–Xrs2 and Sae2 promote 5′ strand resection of DNA double-strand breaks

Abstract

SummaryThe repair of DNA double-strand breaks by homologous recombination is essential for genomic stability. The first step in this process is resection of 5’ strands to generate 3’ single-stranded DNA intermediates. Efficient resection in budding yeast requires the Mre11–Rad50–Xrs2 (MRX) complex and the Sae2 protein, although the role of MRX has been unclear since Mre11 paradoxically exhibits 3’ to 5’ exonuclease activity in vitro. Here we reconstitute resection with purified MRX, Sae2, and Exo1 proteins and show that degradation of the 5’ strand is catalyzed by Exo1 yet completely dependent on MRX and Sae2 when Exo1 levels are limiting. This stimulation is largely the result of cooperative binding of DNA substrates by Exo1, MRX, and Sae2. This work establishes the direct role of MRX and Sae2 in promoting the resection of 5’ strands in DNA double-strand break repair.