Abstract

Enzymatic oxidations of thiophenes, including thiophene-containing drugs, are important for biodesulfurization of crude oil and drug metabolism of mono- and poly-cyclic thiophenes. Thiophene oxidative dearomatization pathways involve reactive metabolites, whose detection is important in the pharmaceutical industry, and are catalyzed by monooxygenase (sulfoxidation, epoxidation) and dioxygenase (sulfoxidation, dihydroxylation) enzymes. Sulfoxide and epoxide metabolites of thiophene substrates are often unstable, and, while cis-dihydrodiol metabolites are more stable, significant challenges are presented by both types of metabolite. Prediction of the structure, relative and absolute configuration, and enantiopurity of chiral metabolites obtained from thiophene enzymatic oxidation depends on the substrate, type of oxygenase selected, and molecular docking results. The racemization and dimerization of sulfoxides, cis/trans epimerization of dihydrodiol metabolites, and aromatization of epoxides are all factors associated with the mono- and di-oxygenase-catalyzed metabolism of thiophenes and thiophene-containing drugs and their applications in chemoenzymatic synthesis and medicine.

Highlights

  • The link between aromaticity and resulting molecular stability is well established, enzymes have a remarkable capacity for dearomatization of many stable and recalcitrant arene and heteroarene substrates

  • The most convincing indirect evidence for thiophene epoxide intermediates being formed by CYP450-catalyzed oxidation of thiophenes comes from the formation of transhydroxysulfide adducts (Scheme 11)

  • A major emphasis of this review has been on the complementary nature of monooxygenase and dioxygenase enzyme activities, in the context of oxidative dearomatization of mono- and poly-cyclic thiophenes

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Summary

Introduction

The link between aromaticity and resulting molecular stability is well established, enzymes have a remarkable capacity for dearomatization of many stable and recalcitrant arene and heteroarene substrates. Attempted chemical approaches to the oxidative dearomatization reactions of carbocyclic arenes, shown in Scheme 1a, often result in further oxidation, or rearomatization of the initial products Due to their instability, relatively few arene oxide metabolites B have been isolated from monooxygenase (MO)-catalyzed epoxidations of substituted benzene substrates A. Studies of the bacterial metabolism of thiaarenes showed that dioxygenase-catalyzed cis-dihydroxylation of carbocyclic and heterocyclic rings could yield chiral cis-dihydrodiols as transient metabolites. Isolation of these intermediates was possible when using P. putida mutant strains (or E. coli recombinant strains), ex-. ColipFDTG141) yielded only a phenyl ring cis-dihydrodiol 8g, while an alternative strain (E. coli-pF352V) gave thienyl ring cis:trans dihydrodiols (2g:4g) exclusively (Table 1) This shows the value of having different bacterial strains and dioxygenase enzymes available to produce preferred metabolites

Oxidations of Thiophenes 1a–g to Yield Sulfoxide Metabolites
Dioxygenase-Catalyzed Dearomatization of Tri- and Tetra-Cyclic Thiaarenes
Application of Thiophene cis-Dihydrodiols in Thiophene Epoxide Synthesis
Monooxygenase-Catalyzed Thiophene Ring Oxidation of Thienopyridine Prodrugs
Findings
Conclusions

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