Abstract
The separation of three major populations of proteoglycans (PG) by molecular sieve chromatography with either controlled-pore glass beads (CPG) or 1% agarose (A-150m) is compared. The resolving power and recovery on CPG or A-150m columns are comparable. However, CPG columns can be operated at a flow rate 50–100 times higher than those packed with 1% agarose. Chromatography on A-150m separates the purifled PG into three major peaks in a single run. Two sequential runs using material of two different pore sizes (CPG-10-1250, CPG-10-2500) are needed to obtain the same separation with CPG. CPG-10-1250 separates the ubiquitous peak (II) from the two peaks known to have an aggregate-subunit relationship. CPG-10-2500 resolves these two peaks allowing analysis of their interactions. Larger pore sized beads (CPG-10-2795) reveal size heterogeneity within the PG aggregate population.
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