Abstract

The National Agricultural Biotechnology Information Center (NABIC) constructed a web-based molecular marker database to provide information about 7,847 sequence-tagged site (STS) markers identified in the 11 species using a next generation sequencing (NGS) technologies. The database consists of three major functional categories: keyword search, detailed viewer and download function. The molecular marker annotation table provides detailed information such as ownership information, basic information, and STS-related characterization information.AvailabilityThe database is available for free at http://nabic.rda.go.kr/Molecularmarker

Highlights

  • A molecular marker is a fragment of DNA that is associated Considering the significance of molecular marker database, the with a certain location within the genome

  • Data collection The information on molecular markers was collectively (STS), cleaved amplified polymorphic sequences (CAPS), acquired from the research projects supported by Nextmicrosatellites or simple sequence repeat (SSR), and single nucleotide polymorphism (SNP) [2]

  • We developed a web-based system to enable searches for agricultural markers and to provide various services

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Summary

Introduction

A molecular marker is a fragment of DNA that is associated Considering the significance of molecular marker database, the with a certain location within the genome. Molecular markers are used in molecular biology to identify a particular sequence in a pool of unknown DNA. Molecular markers are widely used in genetic studies of agricultural plants.

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