Molecular analysis of interspecific and intergeneric relationships of Banksia using RAPDs and non-coding chloroplast DNA sequences

Abstract

Random amplified polymorphic DNA (RAPD) and chloroplast DNA (cpDNA) markers were used to study interspecific and intergeneric relationships of Banksia (Proteaceae) to aid breeding of the genus for cut flower production. The accepted morphological phylogeny of Banksia, with two subgenera, two sections and 13 series, is unclear regarding the relationships of the commercial cut flower species B. coccinea. Fifteen RAPD primers and a non-coding cpDNA sequence between the trnL (UAA) and trnF (GAA) gene were applied to species of Banksia, the related genus Dryandra, and to Musgravea heterophylla as the outgroup, with cluster analysis applied to the results. The two methods were in broad agreement with each other, and with the accepted taxonomy, with closely related species pairs and groups clustering together, but RAPDs were not informative between distantly related species or species pairs. Banksia coccinea clustered with Dryandra and formed a polytomy with 2 Dryandra species and the two sections of subgenus Banksia. Subgenus Isostylis formed a polytomy with D. formosa, basal to subgenus Banksia, but with B. cuneata and B. illicifolia (both in subgenus Isostylis) polyphyletic. Dryandra did not separate as a clade and fell within Banksia, raising questions about the currently accepted view of the two as sister genera with parallel morphological development. The results indicate that interspecific and intergeneric hybridisation with genus Dryandra and subgenus Banksia may be possible routes for improvement of the commercial species B. coccinea.