Abstract

Mitochondria are highly dynamic cellular organelles with the ability to change size, shape, and position over the course of a few seconds. Mitochondrial organelle movement refers to the problem of finding fission and fusion and generates energy for the cell. In this paper, we proposed a deep learning method [mitochondrial organelle movement classification (MOMC)] for mitochondrial movement classification using a convolutional neural network. We present a three-step feature description strategy, such as local descriptions, which is first extracted via the GoogLeNet, followed by the production of mid-level features by ResNet-50 and global descriptor features by Inception-V3 model and final classification of the position of mitochondrial organelle movement. Our method consists of a deep classification network, MOMC for gathering the organelle position, and a verification network for classification accuracy by removing false positives. Using machine learning methods, logistic regression (LR), support vector machine (SVM), and convolutional neural networks (CNNs), we found that the CNN better classified the shape of mitochondrial organelles (fission and fusion). Employing 24 types (position) of images, a convolutional neural network was trained to identify mitochondrial organelle movement with 96.32% accuracy. This enabled the discovery of position, further advancing the clinical utility of human mitochondrial organelles.

Highlights

  • Mitochondrial movement, position, and shape are controlled by fission and fusion

  • We proposed a method for analysis of mitochondrial organelle movement, including cell fission and fusion using convolutional neural networks (CNNs)

  • movement classification (MOMC) was used in mitochondrial organelle shape recognition and prediction based on the shape of mitochondria

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Summary

Introduction

Mitochondrial movement, position, and shape are controlled by fission and fusion. Mitochondria have two types of fusion protein mutations, including, mitofusin-2 (MFN2) or optic atrophy protein (Opa1), which has been associated with neurological disorders, that are identified in neurological patients. Mutations in mitofusin-2 and Opa have been linked to Charcot-Marie-Tooth disease and optic atrophy, respectively. Optic atrophy is common in hereditary blindness. We hypothesized that it may be possible to predict mitochondrial movement position fission and fusion (see Fig.). Prediction of mitochondrial organelle movement position in clinical decision is vital especially in neurological patients showing blindness.

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