Abstract

miRNA profiles are promising biomarker candidates for a manifold of human pathologies, opening new avenues for diagnosis and prognosis. Beyond studies that describe miRNAs frequently as markers for specific traits, we asked whether a general pattern for miRNAs across many diseases exists. We evaluated genome-wide circulating profiles of 1,049 patients suffering from 19 different cancer and non-cancer diseases as well as unaffected controls. The results were validated on 319 individuals using qRT-PCR. We discovered 34 miRNAs with strong disease association. Among those, we found substantially decreased levels of hsa-miR-144* and hsa-miR-20b with AUC of 0.751 (95% CI: 0.703–0.799), respectively. We also discovered a set of miRNAs, including hsa-miR-155*, as rather stable markers, offering reasonable control miRNAs for future studies. The strong downregulation of hsa-miR-144* and the less variable pattern of hsa-miR-155* has been validated in a cohort of 319 samples in three different centers. Here, breast cancer as an additional disease phenotype not included in the screening phase has been included as the 20th trait. Our study on 1,368 patients including 1,049 genome-wide miRNA profiles and 319 qRT-PCR validations further underscores the high potential of specific blood-borne miRNA patterns as molecular biomarkers. Importantly, we highlight 34 miRNAs that are generally dysregulated in human pathologies. Although these markers are not specific to certain diseases they may add to the diagnosis in combination with other markers, building a specific signature. Besides these dysregulated miRNAs, we propose a set of constant miRNAs that may be used as control markers.

Highlights

  • MiRNA profiles are promising biomarker candidates for a manifold of human pathologies, opening new avenues for diagnosis and prognosis

  • Abnormal miRNA profiles have been associated with many human pathogenic processes as shown by many studies that focused on tissue-derived miRNA profiles

  • Identification of miRNAs generally indicating the presence of a disease We asked if there is a general association between the expression of certain miRNAs in peripheral blood and the presence of a disease

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Summary

Introduction

MiRNA profiles are promising biomarker candidates for a manifold of human pathologies, opening new avenues for diagnosis and prognosis. The small non-coding miRNAs are known to be involved in crucial biological processes such as proliferation, apoptosis, differentiation, or development [4,5,6]. Abnormal miRNA profiles have been associated with many human pathogenic processes as shown by many studies that focused on tissue-derived miRNA profiles (e.g., from patients with lung cancer [10], breast cancer [11], or glioblastoma [12]). Since these small nucleic acids excel in their high stability, they have become even more attractive as biomarker candidates. Many groups investigated circulating miRNA profiles from serum for various diseases (non-ischemic systolic heart failure [13], pulmonary tuberculosis [14], non-small-cell lung cancer [15,16], breast cancer [17], prostate cancer [18], or ovarian cancer [19]), whereas we and others developed standardized operating procedures for measuring miRNA profiles from whole peripheral blood (myocardial infarction [20], lung cancer [21], multiple sclerosis [22,23], melanoma [24], ovarian cancer [25], chronic obstructive pulmonary disease [26], glioblastoma [27], and Alzheimer disease [28])

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