Abstract

Cellular and systemic responses to low oxygen levels are principally mediated by Hypoxia Inducible Factors (HIFs), a family of evolutionary conserved heterodimeric transcription factors, whose alpha- and beta-subunits belong to the bHLH-PAS family. In normoxia, HIFα is hydroxylated by specific prolyl-4-hydroxylases, targeting it for proteasomal degradation, while in hypoxia the activity of these hydroxylases decreases due to low oxygen availability, leading to HIFα accumulation and expression of HIF target genes. To identify microRNAs required for maximal HIF activity, we conducted an overexpression screen in Drosophila melanogaster, evaluating the induction of a HIF transcriptional reporter. miR-190 overexpression enhanced HIF-dependent biological responses, including terminal sprouting of the tracheal system, while in miR-190 loss of function embryos the hypoxic response was impaired. In hypoxic conditions, miR-190 expression was upregulated and required for induction of HIF target genes by directly inhibiting the HIF prolyl-4-hydroxylase Fatiga. Thus, miR-190 is a novel regulator of the hypoxia response that represses the oxygen sensor Fatiga, leading to HIFα stabilization and enhancement of hypoxic responses.

Highlights

  • Cells and organisms exposed to environmental stress mount complex adaptive responses in order to maintain homeostasis

  • A key mediator of this response is Hypoxia Inducible Factors (HIFs), a transcription factor that induces the expression of a set of genes that mediate the adaptive response to hypoxia

  • The most important regulation of HIF is exerted by a family of prolyl-4-hydroxylases (PHDs), which prevent HIF accumulation under normal oxygen levels and lift this inhibition of HIF only in hypoxia

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Summary

Introduction

Cells and organisms exposed to environmental stress mount complex adaptive responses in order to maintain homeostasis. Responses to hypoxia are principally mediated by a family of transcription factors named Hypoxia Inducible Factors (HIFs) [7,8,9,10,11,12], that are heterodimers composed of an oxygen regulated α-subunit (HIFα) and a constitutive β-subunit (HIFβ) [13,14]. HIFα is hydroxylated on two specific prolyl residues within the oxygen-dependent degradation (ODD) domain, enabling binding to the von Hippel-Lindau (VHL) tumor suppressor protein, a component of the elongin BC/ cullin-2/VHL ubiquitin-protein ligase complex, which targets HIFα for degradation at the 26S proteasome [16,17,18]. In hypoxia HIFα is not hydroxylated, accumulates, translocates to the nucleus, dimerizes with HIFβ and binds to HIF-responsive elements (HREs), promoting transcription of target genes [21,22,23]

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