Abstract

Cytochrome bd is a tri-heme (b 558, b 595, d) respiratory oxygen reductase that is found in many bacteria including pathogenic species. It couples the electron transfer from quinol to O2 with generation of an electrochemical proton gradient. We examined photolysis and subsequent recombination of CO with isolated cytochrome bd from Escherichia coli in one-electron reduced (MV) and fully reduced (R) states by microsecond time-resolved absorption spectroscopy at 532-nm excitation. Both Soret and visible band regions were examined. CO photodissociation from MV enzyme possibly causes fast (τ<1.5 µs) electron transfer from heme d to heme b 595 in a small fraction of the protein, not reported earlier. Then the electron migrates to heme b 558 (τ∼16 µs). It returns from the b-hemes to heme d with τ∼180 µs. Unlike cytochrome bd in the R state, in MV enzyme the apparent contribution of absorbance changes associated with CO dissociation from heme d is small, if any. Photodissociation of CO from heme d in MV enzyme is suggested to be accompanied by the binding of an internal ligand (L) at the opposite side of the heme. CO recombines with heme d (τ∼16 µs) yielding a transient hexacoordinate state (CO-Fe2+-L). Then the ligand slowly (τ∼30 ms) dissociates from heme d. Recombination of CO with a reduced heme b in a fraction of the MV sample may also contribute to the 30-ms phase. In R enzyme, CO recombines to heme d (τ∼20 µs), some heme b 558 (τ∼0.2–3 ms), and finally migrates from heme d to heme b 595 (τ∼24 ms) in ∼5% of the enzyme population. Data are consistent with the recent nanosecond study of Rappaport et al. conducted on the membranes at 640-nm excitation but limited to the Soret band. The additional phases were revealed due to differences in excitation and other experimental conditions.

Highlights

  • A bd-type terminal respiratory oxidase has been found only in prokaryotes [1]

  • Bacterial strain The strain of Escherichia coli GO105 devoid of cytochrome bo3 and cytochrome bd oxidases and harboring plasmid pTK1 with the genes encoding cytochrome bd was used for overexpressing cytochrome bd [32]

  • Cytochrome bd is isolated from E. coli in the form of a stable oxy complex of ferroheme d, with both hemes b being ferric (MV-O2)

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Summary

Introduction

Cytochrome bd couples the electron transfer from quinol to molecular oxygen (reducing the latter to water) with generation of an electrochemical proton gradient across the cytoplasmic membrane [2,3,4,5]; the energetic efficiency of such coupling is two times lower than that of the cytochrome bo3 [6,7] and aa3-type cytochrome oxidases [8,9]. Its three-dimensional structure has not been solved yet This integral membrane protein is known to be composed of two different subunits carrying three hemes, b558, b595, and d, which are likely located near the periplasmic side of the membrane [10]. The protons required to reduce O2 are most likely taken from the cytoplasmic side of the membrane via an extended transmembrane H+-pathway [3,5], to the typical aa3-type oxidases. The nature of the heme d axial ligand is not known with certainty, this might be Glu of subunit I [34]

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