Abstract

MiRNAs are known to regulate gene expression and in the context of cancer have been shown to regulate metastasis, cell proliferation and cell death. In this report we describe potential miRNA regulatory roles with respect to induction of cell death by pharmacologic dose of Epidermal Growth Factor (EGF). Our previous work suggested that multiple pathways are involved in the induction of apoptosis, including interferon induced genes, cytokines, cytoskeleton and cell adhesion and TP53 regulated genes. Using miRNA time course expression profiling of EGF treated A431 cells and coupling this to our previous gene expression and proteomic data, we have been able to implicate a number of additional miRNAs in the regulation of apoptosis. Specifically we have linked miR-134, miR-145, miR-146b-5p, miR-432 and miR-494 to the regulation of both apoptotic and anti-apoptotic genes expressed as a function of EGF treatment. Whilst additional miRNAs were differentially expressed, these had the largest number of apoptotic and anti-apoptotic targets. We found 5 miRNAs previously implicated in the regulation of apoptosis and our results indicate that an additional 20 miRNAs are likely to be involved based on their correlated expression with targets. Certain targets were linked to multiple miRNAs, including PEG10, BTG1, ID1, IL32 and NCF2. Some miRNAs that target the interferon pathway were found to be down regulated, consistent with a novel layer of regulation of interferon pathway components downstream of JAK/STAT. We have significantly expanded the repertoire of miRNAs that may regulate apoptosis in cancer cells as a result of this work.

Highlights

  • The epidermal growth factor receptor (HER1) and HER2 are members of the receptor tyrosine kinase type one (RTK-I) family

  • We have identified novel interaction regulatory networks based on the crosstalk between miRNAs and messenger RNA (mRNA)/protein that resulted in the induction of apoptosis in A431 cells

  • We have identified a number of miRNAs that may play an important role in the regulation of apoptosis in A431 cells after Epidermal growth factor (EGF) treatment

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Summary

Introduction

The epidermal growth factor receptor (HER1) and HER2 are members of the receptor tyrosine kinase type one (RTK-I) family. Activation of these receptors plays crucial roles in survival, PLOS ONE | DOI:10.1371/journal.pone.0120337. Activation of HER 1 signalling usually induces either proliferation or cell survival [3], a fact that has resulted in a strategy that targets RTK-I mediated survival signals in cancer [4,5,6,7,8,9,10]. Because MicroRNAs (miRNAs) are known to regulate pathways governing cancer cell survival, differentiation and metastasis we expected that they might be important regulators of the above gene expression/protein subnetworks

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