Microbial diversity along a sediment detrital particle size gradient

Abstract

We studied the structural organization of microbial decomposer communities by comparing patterns of genetic complexity over a template defined by site, season and detrital particle size. Epibenthic sediment samples were collected monthly from a Lake Erie coastal wetland and a small woodland stream, and sieved into five fine particulate organic matter (FPOM) size ranges: 1000–500 (500), 500–250 (250), 250–125 (125), 125–63 (63) and 63–38 (38) μm. Whole community DNA-DNA hybridizations were used to compare the structural similarity of the microbial communities associated with each sample. Microbial community heterogeneity increased as particle size decreased, and declined from a summer maximum to a late winter minimum. Cluster analysis of hybridization scores partitioned the communities into two groups: one associated with the 500, 250 and 125 μm fractions and a second with the 63 and 38 μm fractions. The larger particles were easily recognized as comminuted plant detritus; the smaller particles were amorphous, presumably formed through the aggregation of dissolved organic carbon. This disjunction in particle morphology and microbial community diversity that occurs at about 100 μm appears to delineate two trophic resources whose origin and fate may be largely independent.