Abstract

NUT midline carcinoma (NMC) is a rare but highly aggressive cancer typically caused by the translocation t(15;19), which results in the formation of the BRD4-NUT fusion oncoprotein. Previous studies have demonstrated that fusion of the NUT protein with the double bromodomains of BRD4 may significantly alter the cellular gene expression profile to contribute to NMC tumorigenesis. However, the mechanistic details of this BRD4-NUT function remain poorly understood. In this study, we examined the NUT function in transcriptional regulation by targeting it to a LacO transgene array integrated in U2OS 2-6-3 cells, which allow us to visualize how NUT alters the in situ gene transcription dynamic. Using this system, we demonstrated that the NUT protein tethered to the LacO locus recruits p300/CREB-binding protein (CBP), induces histone hyperacetylation, and enriches BRD4 to the transgene array chromatin foci. We also discovered that, in BRD4-NUT expressed in NMC cells, the NUT moiety of the fusion protein anchored to chromatin by the double bromodomains also stimulates histone hyperacetylation, which causes BRD4 to bind tighter to chromatin. Consequently, multiple BRD4-interacting factors are recruited to the NUT-associated chromatin locus to activate in situ transgene expression. This gene transcription function was repressed by either expression of a dominant negative inhibitor of the p300-NUT interaction or treatment with (+)-JQ1, which dissociates BRD4 from the LacO chromatin locus. Our data support a model in which BRD4-NUT-stimulated histone hyperacetylation recruits additional BRD4 and interacting partners to support transcriptional activation, which underlies the BRD4-NUT oncogenic mechanism in NMC.

Highlights

  • nuclear protein in testis (NUT) midline carcinoma is an aggressive cancer typically caused by the formation of the bromodomain-containing protein 4 (BRD4)-NUT fusion oncoprotein

  • We demonstrated that NUT protein recruits p300/CREB-binding protein (CBP), induces histone hyperacetylation, and enriches additional BRD4 and associated transcription factors at its associated chromatin locus to stimulate in situ gene transcription

  • NUT Activates in Situ Gene Transcription by Recruiting histone acetyltransferases (HATs), Inducing Histone Acetylation and BRD4 Enrichment— We discovered that the BRD4-NUT fusion oncoprotein expressed in NUT midline carcinoma (NMC) cells sequesters transcription factors in hyperacetylated chromatin foci to stimulate some gene expression while repressing the expression of others [22, 25]

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Summary

Background

NUT midline carcinoma is an aggressive cancer typically caused by the formation of the BRD4-NUT fusion oncoprotein. We examined the NUT function in transcriptional regulation by targeting it to a LacO transgene array integrated in U2OS 2-6-3 cells, which allow us to visualize how NUT alters the in situ gene transcription dynamic Using this system, we demonstrated that the NUT protein tethered to the LacO locus recruits p300/ CREB-binding protein (CBP), induces histone hyperacetylation, and enriches BRD4 to the transgene array chromatin foci. We tethered NUT to a LacO transgene array integrated in U2OS 2-6-3 cells using the LacICHERRY-NUT fusion, which allowed us to directly visualize transcriptional activities associated with NUT from individual transcription sites at the levels of DNA and RNA in single cells [25, 26] Using this system, we demonstrated that NUT protein recruits p300/CBP, induces histone hyperacetylation, and enriches additional BRD4 and associated transcription factors at its associated chromatin locus to stimulate in situ gene transcription. Our study reveals the mechanistic details for BRD4-NUT function in transcriptional regulation and will aid future investigation of the NMC oncogenic mechanism

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