Abstract

Metazoans differentially express multiple Hox transcription factors to specify diverse cell fates along the developing anterior-posterior axis. Two challenges arise when trying to understand how the Hox transcription factors regulate the required target genes for morphogenesis: First, how does each Hox factor differ from one another to accurately activate and repress target genes required for the formation of distinct segment and regional identities? Second, how can a Hox factor that is broadly expressed in many tissues within a segment impact the development of specific organs by regulating target genes in a cell type-specific manner? In this review, we highlight how recent genomic, interactome, and cis-regulatory studies are providing new insights into answering these two questions. Collectively, these studies suggest that Hox factors may differentially modify the chromatin of gene targets as well as utilize numerous interactions with additional co-activators, co-repressors, and sequence-specific transcription factors to achieve accurate segment and cell type-specific transcriptional outcomes.

Highlights

  • Hox genes have long fascinated developmental biologists for the essential roles that they play in specifying different segment and regional identities along the developing anterior-posterior (A-P) axis of metazoans

  • Drosophila has eight Hox genes that are separated into two distinct chromosomal clusters: The Antennapedia cluster consists of five Hox genes [labial, proboscipedia, Deformed (Dfd), Sex combs reduced (Scr), and Antennapedia (Antp)] that collectively regulate head and anterior thoracic development, whereas the three Hox genes in the Bithorax cluster [Ultrabithorax (Ubx), abdominal-A, Hox-Mediated Transcriptional Outcomes and Abdominal-B (Abd-B)] specify cell fates within the third thoracic segment and the abdominal segments (Morata et al, 1990; Maeda and Karch, 2009)

  • Hox factors are expressed within many cell types of a segment, and yet most Hox target genes are regulated in only a small subset of the cells that express the Hox transcription factor (TF)

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Summary

Introduction

Hox genes have long fascinated developmental biologists for the essential roles that they play in specifying different segment and regional identities along the developing anterior-posterior (A-P) axis of metazoans. The above findings suggest that the Ubx Hox factor, which is differentially expressed in the Drosophila imaginal discs, directs the formation of different cell and tissue fates by regulating distinct target genes within highly similar chromatin landscapes.

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