Abstract

The LDL receptor (LDL-R) mediates cholesterol metabolism in humans by binding and internalizing cholesterol transported by LDL. Several different molecular mechanisms have been proposed for the binding of LDL to LDL-R at neutral plasma pH and for its release at acidic endosomal pH. The crystal structure of LDL-R at acidic pH shows that the receptor folds back on itself in a closed form, obscuring parts of the ligand binding domain with the epidermal growth factor (EGF)-precursor homology domain. We have used a structure-based site-directed mutagenesis approach to examine 12 residues in the extracellular domain of LDL-R for their effect on LDL binding and release. Our studies show that the interface between the ligand binding domain and the EGF-precursor homology domain seen at acidic pH buries residues mediating both LDL binding and release. Our results are consistent with an alternative model of LDL-R whereby multiple modules of the extracellular domain interact with LDL at neutral pH, concurrently positioning key residues so that at acidic pH the LDL-R:LDL interactions become unfavorable, triggering release. After LDL release, the closed form of LDL-R may target its return to the cell surface.

Highlights

  • The LDL receptor (LDL-R) mediates cholesterol metabolism in humans by binding and internalizing cholesterol transported by LDL

  • We focused on residues that appear important to maintain the closed conformation of low density lipoprotein receptor (LDL-R) seen in the crystal structure at acidic pH and examined their effect on LDL binding and release

  • DNA mutagenesis Mutants of the human LDL receptor extracellular domain in pFastBac1 were generated with the Quickchange kit (Stratagene)

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Summary

Introduction

The LDL receptor (LDL-R) mediates cholesterol metabolism in humans by binding and internalizing cholesterol transported by LDL. The crystal structure of LDL-R at acidic pH shows that the receptor folds back on itself in a closed form, obscuring parts of the ligand binding domain with the epidermal growth factor (EGF)-precursor homology domain. Our studies show that the interface between the ligand binding domain and the EGF-precursor homology domain seen at acidic pH buries residues mediating both LDL binding and release. The extracellular domain of LDL-R contains seven cysteine-rich repeats (R1–R7, called LA1–LA7), two epidermal growth factor (EGF)-like repeats (EGF-A and EGF-B), a ␤-propeller domain, and a third EGF-like repeat (EGF-C) tethered to the cell surface by a single transmembrane segment [8,9,10]. The side chains of Asp196, Asp200, Asp206, and Glu207 and the carbonyl oxygens of Trp193 and Gly198 coordinate the Ca2+ ion within R5, a cysteine-rich repeat essential for all lipoprotein binding [11]. The analogous Ca2+-binding residues in R4, Asp147, Asp151, Asp157, and Glu158 provide side chains, and Trp144 and Asp149 provide backbone carbonyl oxygens

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