Abstract
2DE and 2D-DIGE based proteomics analysis of serum from women with endometriosis revealed several proteins to be dysregulated. A complete list of these proteins along with their mass spectrometry data and subsequent bioinformatics analysis are presented here. The data is related to “Investigation of serum proteome alterations in human endometriosis” by Dutta et al. [1].
Highlights
Mass spectrometry (AB Sciex 4800 MALDI-TOF/TOF) and bioinformatics analysis was performed acquired using PANTHER, DAVID, WebGestalt and STRING
Once the spots were detected, all the gels were imported to the biological variation analysis (BVA) module of the DeCyder software for spot wise protein abundance comparison across all the experimental groups (ES vs. LS vs. controls)
In gel trypsin digestion and mass spectrometry analysis were performed as discussed in Ray et al [2]
Summary
Mass spectrometry data of the 25 significantly differentially expressed proteins provided. Molecular and biological functions of the identified proteins presented. The data is expected to help in understanding of endometriosis pathophysiology and for further studies and data mining
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