Abstract

MALAT1-associated small cytoplasmic RNA (mascRNA) is a cytoplasmic tRNA-like small RNA derived from nucleus-located long noncoding RNA (lncRNA) metastasis-associated lung adenocarcinoma transcript 1 (MALAT1). While MALAT1 was extensively studied and was found to function in multiple cellular processes, including tumorigenesis and tumor progression, the role of mascRNA was largely unknown. Here we show that mascRNA is upregulated in multiple cancer cell lines and hepatocellular carcinoma (HCC) clinical samples. Using HCC cells as model, we found that mascRNA and its parent lncRNA MALAT1 can both promote cell proliferation, migration, and invasion in vitro. Correspondingly, both of them can enhance the tumor growth in mice subcutaneous tumor model and can promote metastasis by tail intravenous injection of HCC cells. Furthermore, we revealed that mascRNA and MALAT1 can both activate ERK/MAPK signaling pathway, which regulates metastasis-related genes and may contribute to the aggressive phenotype of HCC cells. Our results indicate a coordination in function and mechanism of mascRNA and MALAT1 during development and progress of HCC, and provide a paradigm for deciphering tRNA-like structures and their parent transcripts in mammalian cells.

Highlights

  • The majority of human genome is transcribed and engenders a complex network of transcripts including ~20,000 protein coding RNAs and hundreds of thousands of transcripts with little or no protein coding capacity[1,2]

  • Using hepatocellular carcinoma (HCC) cells as models, we showed that both metastasis-associated lung adenocarcinoma transcript 1 (MALAT1)-associated small cytoplasmic RNA (mascRNA) and MALAT1 can promote cell proliferation, migration, and invasion in vitro and in vivo

  • Our results are consistent with several recent studies of MALAT1 in HCC, confirming that MALAT1 plays an oncogenic role in HCC by promoting cell proliferation, migration, and invasion[41,42,43,44]

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Summary

Introduction

The majority of human genome is transcribed and engenders a complex network of transcripts including ~20,000 protein coding RNAs and hundreds of thousands of transcripts with little or no protein coding capacity[1,2]. Besides lots of these noncoding RNAs function as regulators of gene expression, a significant fraction of them can serve as precursors for small RNAs3. The metastasis-associated lung adenocarcinoma transcript 1(MALAT1) is one of the most well-known lncRNAs8. Processing MALAT1 nascent transcript yields a long nuclear-retained ncRNA and a cytoplasmic small tRNA-like RNA derived from 3′

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