Marker‐trait association analysis for postharvest needle retention/abscission in balsam fir (Abies balsamea)

Abstract

AbstractBalsam fir the principal tree species of the Christmas tree industry, is a major export commodity of Atlantic Canada region. However, postharvest needle abscission poses a main concern leading to low consumer satisfaction and a shift in preference towards artificial trees. The search for diverse balsam fir lines with high needle retention is very crucial for quality improvement programmes. In this regard, a panel of 75 balsam fir genotypes exhibiting diversity for needle retention traits were randomly selected from a set of 220 genotypes evaluated for needle retention characteristics for two consecutive years (2012 and 2013) and genotyped with 41 bi‐allelic single nucleotide polymorphism (SNP)/insertion/deletion markers. The cluster analysis and population structure identified four and seven subpopulations. We observed an SNP marker with significant association (p < 0.05) with the needle retention/abscission trait by using general linear model and mixed linear model approaches. The present study lays the foundation for analysing the genetic mechanisms underlying needle retention/abscission, as well as the use of molecular markers to target specific traits in balsam fir.