Abstract

Malaria transmission can be affected by multiple or even hidden factors, making it difficult to timely and accurately predict the impact of elimination and eradication programs that have been undertaken and the potential resurgence and spread that may continue to emerge. One approach at the moment is to develop and deploy surveillance systems in an attempt to identify them as timely as possible and thus to enable policy makers to modify and implement strategies for further preventing the transmission. Most of the surveillance data will be of temporal and spatial nature. From an interdisciplinary point of view, it would be interesting to ask the following important as well as challenging question: Based on the available surveillance data in temporal and spatial forms, how can we build a more effective surveillance mechanism for monitoring and early detecting the relative prevalence and transmission patterns of malaria? What we can note from the existing clustering-based surveillance software systems is that they do not infer the underlying transmission networks of malaria. However, such networks can be quite informative and insightful as they characterize how malaria transmits from one place to another. They can also in turn allow public health policy makers and researchers to uncover the hidden and interacting factors such as environment, genetics and ecology and to discover/predict malaria transmission patterns/trends. The network perspective further extends the present approaches to modelling malaria transmission based on a set of chosen factors. In this article, we survey the related work on transmission network inference, discuss how such an approach can be utilized in developing an effective computational means for inferring malaria transmission networks based on partial surveillance data, and what methodological steps and issues may be involved in its formulation and validation.

Highlights

  • Malaria transmission is challenging to model; its vector can be quite complex due to topographical and climatic variations as well as human mobility [1]

  • This article provides a review of related work on how to develop a computational means for inferring malaria transmission networks in populations, which incorporates: (1) partial surveillance data over time, i.e., the temporal-spatial distributions of cases of infection, and (2) infection models of malaria

  • A transmission network to characterize the temporal-spatial patterns of disease transmission, or a temporal-spatial disease transmission network, consists of a set of nodes and a set of links that connect them, where the nodes correspond to spatial locations, such as villages, with reported/observed disease incidences over time, and the directional links connecting the nodes correspond to the probability/ likelihood of disease “transmission” from one node to another over time, e.g., hidden pathways of malaria transmission

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Summary

Introduction

Malaria transmission is challenging to model; its vector can be quite complex due to topographical and climatic variations as well as human mobility [1]. This article provides a review of related work on how to develop a computational means for inferring malaria transmission networks in populations, which incorporates: (1) partial surveillance data over time, i.e., the temporal-spatial distributions of cases of infection, and (2) infection models of malaria. The problem of computationally inferring malaria transmission networks is both interesting and challenging because, during the process of disease spread, the reported infection cases do not directly reflect the full extent of transmission, nor the underlying transmission patterns. It would be desirable for us to detect such networks from the partially available surveillance data. We may incorporate a malaria infection model, e.g., the Ross-MacDonald model [6]

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