Abstract

In female mammals, activation of Xist (X-inactive specific transcript) is essential for establishment of X chromosome inactivation. During early embryonic development in mice, paternal Xist is preferentially expressed whereas maternal Xist (Xm-Xist) is silenced. Unlike autosomal imprinted genes, Xist imprinting for Xm-Xist silencing was erased in cloned or parthenogenetic but not fertilized embryos. However, the molecular mechanism underlying the variable nature of Xm-Xist imprinting is poorly understood. Here, we revealed that Xm-Xist silencing depends on chromatin condensation states at the Xist/Tsix genomic region and on Rnf12 expression levels. In early preimplantation, chromatin decondensation via H3K9me3 loss and histone acetylation gain caused Xm-Xist derepression irrespective of embryo type. Although the presence of the paternal genome during pronuclear formation impeded Xm-Xist derepression, Xm-Xist was robustly derepressed when the maternal genome was decondensed before fertilization. Once Xm-Xist was derepressed by chromatin alterations, the derepression was stably maintained and rescued XmXpΔ lethality, indicating that loss of Xm-Xist imprinting was irreversible. In late preimplantation, Oct4 served as a chromatin opener to create transcriptional permissive states at Xm-Xist/Tsix genomic loci. In parthenogenetic embryos, Rnf12 overdose caused Xm-Xist derepression via Xm-Tsix repression; physiological Rnf12 levels were essential for Xm-Xist silencing maintenance in fertilized embryos. Thus, chromatin condensation and fine-tuning of Rnf12 dosage were crucial for Xist imprint maintenance by silencing Xm-Xist.

Highlights

  • In mice, the expression of X-inactive specific transcript (Xist), an essential non-coding RNA for the initiation of X-chromosome inactivation (XCI) [1,2,3], commences around early preimplantation phases [4,5]

  • We show that in fertilized embryos, chromatin condensation states are essential maternal Xist repression in early preimplantation phases, whereas at late preimplantation stages, pluripotency factor Oct4 serves as a chromatin opener and the maintenance of Xist silencing depends on Rnf12 expression dosage

  • We demonstrated that chromatin condensation at Xist is preferentially expressed whereas maternal Xist (Xm-Xist)/Tsix genomic loci was essential for Xm-Xist silencing in early preimplantation phases

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Summary

Introduction

The expression of Xist, an essential non-coding RNA for the initiation of X-chromosome inactivation (XCI) [1,2,3], commences around early preimplantation phases [4,5]. At late preimplantation phases, the imprinted Xm-Xist silencing (Xm-Xist imprinting) is partially disrupted in parthenogenetic embryos, which have two maternal X-chromosomes (XmXm) [4,11]. A previous study showed that histone 3 lysine 9 trimethylation (H3K9me3) and/or histone acetylation was involved in Xm-Xist derepression from early preimplantation phases [4]. The question of whether transient alteration of histone modifications from early preimplantation phases could lead to stable Xm-Xist derepression in postimplantation stages has not previously been addressed

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