Abstract

Primary cilia are sensory organelles vital for developmental and physiological processes. Their dysfunction causes a range of phenotypes including retinopathies. Although primary cilia have been described in the retinal pigment epithelium (RPE), little is known about their contribution to biological processes within this tissue. Ciliary proteins are increasingly being identified in non-ciliary locations and might carry out additional functions, disruption of which possibly contributes to pathology. The RPE is essential for maintaining photoreceptor cells and visual function. We demonstrate that upon loss of Bbs8, predominantly thought to be a ciliary gene, the RPE shows changes in gene and protein expression initially involved in signaling pathways and developmental processes, and at a later time point RPE homeostasis and function. Differentially regulated molecules affecting the cytoskeleton and cellular adhesion, led to defective cellular polarization and morphology associated with a possible epithelial-to-mesenchymal transition (EMT)-like phenotype. Our data highlights the benefit of combinatorial “omics” approaches with in vivo data for investigating the function of ciliopathy proteins. It also emphasizes the importance of ciliary proteins in the RPE and their contribution to visual disorders, which must be considered when designing treatment strategies for retinal degeneration.

Highlights

  • Primary cilia are microtubule-based sensory organelles extending from the cell membrane and are indispensable for a variety of developmental and physiological processes

  • We previously demonstrated that Bbs8−/− mice show incomplete maturation of the retinal pigment epithelium (RPE) at postnatal day 0 (P0) prior to development of the photoreceptor outer segment (POS), due in part to over-activation of canonical Wnt signaling (May-Simera et al, 2018)

  • We investigated the effect of Bbs8 deletion in the RPE by carrying out an unbiased QuantSeq 3′ mRNA sequencing analysis of P11 and P29 RPE specimens isolated from Bbs8−/− and Bbs8+/+ mouse eyes

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Summary

Introduction

Primary cilia are microtubule-based sensory organelles extending from the cell membrane and are indispensable for a variety of developmental and physiological processes. As such, they are considered as signaling hubs that transmit extracellular signals, and are involved in regulating many signaling pathways, including Wnt, hedgehog, and transforming growth factor β (Tgf-β) (Fliegauf et al, 2007; Ishikawa and Marshall, 2011; May-Simera et al, 2017, 2018; Pala et al, 2017). Since nearly every cell exhibits a primary cilium, ciliary dysfunction leads to a multitude of different phenotypes, with retinopathy being the most common (Waters and Beales, 2011; May-Simera et al, 2017). BBS genes encode proteins required for ciliary trafficking, making them essential for maintenance and

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