Abstract

The regulation of translation and mRNA degradation in eukaryotic cells involves the formation of cytoplasmic mRNP granules referred to as P-bodies and stress granules. The yeast Pbp1 protein and its mammalian ortholog, Ataxin-2, localize to stress granules and promote their formation. In Saccharomyces cerevisiae, Pbp1 also interacts with the Pab1, Lsm12, Pbp4, and Dhh1 proteins. In this work, we determined whether these Pbp1 interacting proteins also accumulated in stress granules and/or could affect their formation. These experiments revealed the following observations. First, the Lsm12, Pbp4, and Dhh1 proteins all accumulate in stress granules, whereas only the Dhh1 protein is a constitutive P-body component. Second, deletion or over-expression of the Pbp4 and Lsm12 proteins did not dramatically affect the formation of stress granules or P-bodies. In contrast, Pbp1 and Dhh1 over-expression inhibits cell growth, and for Dhh1, leads to the accumulation of stress granules. Finally, a strain lacking the Pab1 protein was reduced at forming stress granules, although they could still be detected. This indicates that Pab1 affects, but is not absolutely required for, stress granule formation. These observations offer new insight into the function of stress granule components with roles in stress granule assembly and mRNP regulation.

Highlights

  • An important part of the cellular response to stress or environmental stimuli is the modulation of cytoplasmic mRNA translation and degradation, which allows for substantial changes in the population of pre-existing mRNAs

  • These results suggest that Pbp1, Pbp4, and Lsm12 could possibly form a complex localizing in and affecting stress granule formation

  • Our results suggest that these factors are not critical for stress granule formation, as stress granules were still able to form in their absence

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Summary

Introduction

An important part of the cellular response to stress or environmental stimuli is the modulation of cytoplasmic mRNA translation and degradation, which allows for substantial changes in the population of pre-existing mRNAs. P-bodies are present in low numbers under normal cellular conditions and in elevated numbers following inhibition of translation initiation and/or many environmental stresses [reviewed in 1,2]. The composition of stress granules is different than that of P-bodies, suggesting that the two granules have different functions in the mRNA lifecycle. Stress granules contain translation initiation components and a diverse array of mRNA binding proteins, but the exact composition can vary depending upon the stress [5,6,7,8,9,10,11,12]. During heat shock in yeast, similar stress granules form that contain eIF3, a hallmark factor in mammalian stress granules [9]. The change in composition of stress granules, which is dependent upon the nature of the stress, might be explained by different stresses causing different rate-limiting steps in the assembly of translation initiation complexes [8,9,12]

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