Abstract

Remote sensing shows potential for assessing biodiversity of coral reefs. Important steps in achieving this objective are better understanding the spectral variability of various reef components and correlating these spectral characteristics with field-based ecological assessments. Here we analyze >9400 coral reef field spectra from southwestern Puerto Rico to evaluate how spectral variability and, more specifically, spectral similarity between species influences estimates of biodiversity. Traditional field methods for estimating reef biodiversity using photoquadrats are also included to add ecological context to the spectral analysis. Results show that while many species can be distinguished using in situ field spectra, the addition of the overlying water column significantly reduces the ability to differentiate species, and even groups of species. This indicates that the ability to evaluate biodiversity with remote sensing decreases with increasing water depth. Due to the inherent spectral similarity amongst many species, including taxonomically dissimilar species, remote sensing underestimates biodiversity and represents the lower limit of actual species diversity. The overall implication is that coral reef ecologists using remote sensing need to consider the spatial and spectral context of the imagery, and remote sensing scientists analyzing biodiversity need to define confidence limits as a function of both water depth and the scale of information derived, e.g., species, groups of species, or community level.

Highlights

  • Remote sensing has become increasingly important among the fields of ecology, biodiversity, and conservation, appealing to scientists by providing repeat temporal observations over broad spatial scales and offering relative simplicity for acquiring data over large areas, as compared to extensive fieldwork [1,2,3]

  • We describe methods that provide the opportunity to correlate spectral characteristics with localized in situ measurements of biodiversity that can be scaled-up to the spatial resolution and geographic extent provided through remote sensing image analysis

  • This study demonstrated that average field spectra can be used to differentiate many coral reef species, once the overlying water column is considered the ability to distinguish species significantly declines with increasing water depth

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Summary

Introduction

Remote sensing has become increasingly important among the fields of ecology, biodiversity, and conservation, appealing to scientists by providing repeat temporal observations over broad spatial scales and offering relative simplicity for acquiring data over large areas, as compared to extensive fieldwork [1,2,3]. Rapid and repeatable assessment of coral reef ecosystems has become an important objective for monitoring the associated impacts of climate change on coral reef communities [7,8,9,10] In this regard, remote sensing technologies provide valuable information related to the spatial analysis of ecosystem properties, including habitat composition, biodiversity, and the design of marine protected areas [11,12,13]. Past research indicates that reef components can be differentiated according to general categories, e.g., live coral, carbonate sand, macroalgae, and seagrass [16,19,20,21,22,23,24,25] This knowledge has assisted with the development of reef classification schemes, but further research is required to evaluate how the spectral variability between categories and within categories affects image-derived estimates of biodiversity

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