Abstract

The benefits of plant–microbe interactions have been exploited extensively for nutrient removal. Radial oxygen loss in aquatic macrophytes potentially promotes nitrification and accelerates nitrogen removal through coupled nitrification–denitrification process. Nitrification is likely the limiting activity for an effective nitrogen removal in wetlands. In this work, we have quantified the effect of radial oxygen losses in Typha angustifolia plants in environments of contrasting salinities, including a temporary lagoon, a constructed wetland, and a river estuary. In all sites, radial oxygen diffusion occurred mainly at a narrow band, from 1 to 5 cm from the root tip, and were almost absent at the tip and basal sections of the root (> 5 cm). Root sections with active oxygen diffusion tended to show higher bacterial and archaeal densities in the rhizoplane according to 16S rRNA gene abundance data, except at higher salinities. Archaeal amoA /bacterial amoA gene ratios were highly variable among sites. Archaeal nitrifiers were only favoured over bacteria on the root surface of Typha collected from the constructed wetland. Collectively, radial oxygen loss had little effect on the nitrifying microbial community at the smaller scale (differences according to root-section), and observed differences were more likely related to prevailing physicochemical conditions of the studied environments or to long-term effects of the root microenvironment (root vs sediment comparisons).

Highlights

  • The benefits of plant–microbe interactions have been exploited extensively for nutrient removal

  • Ammonia oxidation is catalysed by the ammonia monooxygenase protein (AMO), which can be quantitatively traced by studying the gene coding for the alpha subunit of the multi-enzymatic ­complex[22]

  • Our results suggested a limited effect of Typha angustifolia radial oxygen loss (ROL) on abundance and composition of ammonia oxidizers

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Summary

Introduction

The benefits of plant–microbe interactions have been exploited extensively for nutrient removal. Radial oxygen loss in aquatic macrophytes potentially promotes nitrification and accelerates nitrogen removal through coupled nitrification–denitrification process. Few attempts have been made to study the specific microbial community in direct contact with the root surface, and decipher how spatial variations in oxygen diffusion due to radial oxygen loss (ROL, defined as the oxygen transfer from root aerenchyma to the rhizoplane and rhizosphere) would affect the composition of microbial communities and enhance the selection of aerobic bacteria and ­archaea[11, 12]. Ammonia oxidation is an interesting model process to understand the effect of oxygen diffusion on the microbial community composition and abundance in roots mainly for two reasons. ROL differences are supposed to occur along the root longitudinal axis due to the presence of apoplastic ­barriers[32], but a direct effect of ROL on the abundance and composition of ammonia oxidizers in the rhizoplane has not been clearly stated so far

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