Abstract

Although soluble guanylyl cyclase (sGC) functions in an environment in which O(2), NO, and CO are potential ligands for its heme moiety, the enzyme displays a high affinity for only its physiological ligand, NO, but has a limited affinity for CO and no affinity for O(2). Recent studies of a truncated version of the sGC beta(1)-subunit containing the heme-binding domain (Boon, E. M., Huang, S H., and Marletta, M. A. (2005) Nat. Chem. Biol., 1, 53-59) showed that introduction of the hydrogen-bonding tyrosine into the distal heme pocket changes the ligand specificity of the heme moiety and results in an oxygen-binding sGC. The hypothesis that the absence of hydrogen-bonding residues in the distal heme pocket is sufficient to provide oxygen discrimination by sGC was put forward. We tested this hypothesis in a context of a complete sGC heterodimer containing both the intact alpha(1)- and beta(1)-subunits. We found that the I145Y substitution in the full-length beta-subunit of the sGC heterodimer did not produce an oxygen-binding enzyme. However, this substitution impeded the association of NO and destabilized the NO.heme complex. The tyrosine in the distal heme pocket also impeded both the binding and dissociation of the CO ligand. We propose that the mechanism of oxygen exclusion by sGC not only involves the lack of hydrogen bonding in the distal heme pocket, but also depends on structural elements from other domains of sGC.

Highlights

  • Soluble guanylyl cyclase4 is a member of the guanylyl cyclase family of proteins, which respond to various ligands by converting GTP into cGMP. sGC stands apart from other members of its family by the nature of its activating ligand

  • We propose that the mechanism of oxygen exclusion by sGC involves the lack of hydrogen bonding in the distal heme pocket, and depends on structural elements from other domains of sGC

  • The T. tengcongensis H-NOX structure reveals that the distal heme pocket Tyr140, which is conserved in H-NOX proteins from anaerobic bacteria [13], is crucial for ligand specificity

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Summary

Ligand Selectivity of Soluble Guanylyl Cyclase

EFFECT OF THE HYDROGEN-BONDING TYROSINE IN THE DISTAL HEME POCKET ON BINDING OF OXYGEN, NITRIC OXIDE, AND CARBON MONOXIDE*. It has been proposed that lack of the distal tyrosine or of other hydrogen bond donors is the key determinant of the oxygen discrimination by the sGC enzyme [10, 13, 14] As this conclusion was based on evidence derived from only a fragment of the sGC enzyme, we tested this hypothesis in the more natural context of the sGC heterodimer, which contains both the full-length ␣- and ␤-subunits. From previous reports, it remained unclear how the tyrosine in the distal heme pocket of sGC affects the specificity of sGC protein for NO and CO. Introduction of a hydrogen-bonding tyrosine into the distal heme pocket strongly affects the binding characteristics of sGC for other gaseous ligands

EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
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