Abstract

The segmentation and classification of leaves in plant images are a great challenge, especially when several leaves are overlapping in images with a complicated background. In this paper, the segmentation and classification of leaf images with a complicated background using deep learning are studied. First, more than 2500 leaf images with a complicated background are collected and artificially labeled with target pixels and background pixels. Two-thousand of them are fed into a Mask Region-based Convolutional Neural Network (Mask R-CNN) to train a model for leaf segmentation. Then, a training set that contains more than 1500 training images of 15 species is fed into a very deep convolutional network with 16 layers (VGG16) to train a model for leaf classification. The best hyperparameters for these methods are found by comparing a variety of parameter combinations. The results show that the average Misclassification Error (ME) of 80 test images using Mask R-CNN is 1.15%. The average accuracy value for the leaf classification of 150 test images using VGG16 is up to 91.5%. This indicates that these methods can be used to segment and classify the leaf image with a complicated background effectively. It could provide a reference for the phenotype analysis and automatic classification of plants.

Highlights

  • To realize sustainable agriculture and boost agricultural yield, plant phenotyping is a significant process [1,2]

  • Mask R-Convolutional Neural Networks (CNNs) only separates the target leaves from the background with masks of different colors

  • The results show that the average Misclassification Error (ME) of segmentation is up to 1.15% using the

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Summary

Introduction

To realize sustainable agriculture and boost agricultural yield, plant phenotyping is a significant process [1,2]. The color and shape of the leaf, plant height, leaf area index, and growth rate are important information for phenotype analysis. The automatic and non-destructive extraction of leaves from the plant images can boost the phenotype analysis. The important information that leaves contain can be used to identify plant species. Plant identification is usually by their floral parts, fruits, and leaves. Flowers and fruits are not suitable for plant identification as they appear for a short interval. On the other hand, are available for a longer duration and are available in abundance. Leaves are a suitable choice for the automatic classification of plants [3]

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