Abstract

AbstractAimRates of colonization, speciation and extinction determine species richness and endemism in insular systems. The general dynamic model of island biogeography (GDM) predicts that speciation and extinction rates depend on island area and elevation via their control on ecological limits to diversification and therefore covary with an island's geological history. Additionally, the colonization rate may increase with area and elevation through the ‘target effect’, which can be mediated by reduced ‘environmental filtering’. Here we test whether the area and depth expansion of an island‐like ecosystem, a lake, caused a shift in diversity dynamics.LocationLake Biwa, Japan, whose geological history and biota are well documented.TaxonFishes.MethodsWe extended the phylogenetic island biogeography framework DAISIE (Dynamic Assembly of Island biota through Speciation, Immigration and Extinction) to accommodate time‐shifts in macroevolutionary rates and in carrying capacity. Using phylogenetic information on colonization and speciation times for the complete Lake Biwa fish community (70 taxa), we tested for a shift in macroevolutionary assembly rates and reconstructed the temporal diversity trajectory in the lake. We assessed the power to identify a shift through a wide range of scenarios and benchmarked against simulated fossil records.ResultsWe detected an increase in colonization rate of fishes at 0.2 million years ago (Ma), with limited support for the existence of ecological limits. The reconstructed diversity trajectory was close to a source‐sink equilibrium diversity prior to the shift and remained well below a new shift‐driven elevated equilibrium thereafter. We found sufficient power to identify an increase in colonization rate up to 1.5 Ma, whereas extinction concealed the signal of earlier shifts.Main conclusionsThe fish diversity dynamics of Lake Biwa show a response to changes in area and depth and phylogenies carry a signature of these changes. The detected increase in colonization rate following Lake Biwa's expansion, elevating the fish diversity, is unlikely due to a predicted increase in ecological limits feeding back on colonization rate. We therefore call for (additional) explanations: the target effect, whereby larger islands attract more species, and reduced environmental filtering due to higher habitat diversity associated with increased lake area/depth.

Highlights

  • Rates of colonization, speciation and extinction determine species richness, endemicity and their trajectories through time in insular systems such as oceanic islands, mountain tops or lakes

  • Speciation and extinction determine species richness, endemicity and their trajectories through time in insular systems such as oceanic islands, mountain tops or lakes. In their equilibrium theory of island biogeography, MacArthur and Wilson (1963, 1967) proposed that islands tend towards a dynamic equilibrium, at which point rates of species gain via colonization equal the rate of species loss via extinction

  • The general dynamic model of island biogeography (GDM) acknowledges that island features such as area, elevation and topographic complexity change throughout the life cycle of an island, and hypothesizes that these ontogenetic changes have an effect on rates of species assembly, leading to diversity dynamics characterized by an ever-shifting, often unattained equilibrium (Warren et al, 2015)

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Summary

Introduction

Speciation and extinction determine species richness, endemicity and their trajectories through time in insular systems such as oceanic islands, mountain tops (sky islands) or lakes In their equilibrium theory of island biogeography, MacArthur and Wilson (1963, 1967) proposed that islands tend towards a dynamic equilibrium, at which point rates of species gain via colonization (and in-situ speciation; Warren et al, 2015) equal the rate of species loss via extinction. The GDM acknowledges that island features such as area, elevation and topographic complexity change throughout the life cycle of an island, and hypothesizes that these ontogenetic changes have an effect on rates of species assembly, leading to diversity dynamics characterized by an ever-shifting, often unattained equilibrium (Warren et al, 2015) In this dynamic setting, there are different ways in which an equilibrium diversity (ephemeral or not) can theoretically be achieved. In both types of equilibria—diversity-dependent or source-sink—the level of equilibrium diversity can be affected by island geomorphological change

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