Abstract

Brain connectivity spans over broad spatial scales, from nanometers to centimeters. In order to understand the brain at multi-scale, the neural network in wide-field has been visualized in detail by taking advantage of light microscopy. However, the process of staining or addition of fluorescent tags is commonly required, and the image contrast is insufficient for delineation of cytoarchitecture. To overcome this barrier, we use spatial light interference microscopy to investigate brain structure with high-resolution, sub-nanometer pathlength sensitivity without the use of exogenous contrast agents. Combining wide-field imaging and a mosaic algorithm developed in-house, we show the detailed architecture of cells and myelin, within coronal olfactory bulb and cortical sections, and from sagittal sections of the hippocampus and cerebellum. Our technique is well suited to identify laminar characteristics of fiber tract orientation within white matter, e.g. the corpus callosum. To further improve the macro-scale contrast of anatomical structures, and to better differentiate axons and dendrites from cell bodies, we mapped the tissue in terms of its scattering property. Based on our results, we anticipate that spatial light interference microscopy can potentially provide multiscale and multicontrast perspectives of gross and microscopic brain anatomy.

Highlights

  • Microscopy[16], SRS17 and OCT18,19

  • We focus on fiber orientation which may potentially serve as a critical biological marker for studying Central Nervous System (CNS) diseases such as Traumatic Brain Injury (TBI)

  • We highlight the use of Spatial Light Interference Microscopy (SLIM), a phase contrast based microscopy technique, to generate high resolution images of ex-vivo mouse brain coronal and sagittal cross-sections

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Summary

Introduction

Microscopy[16], SRS17 and OCT18,19. These imaging modalities are predominantly sensitive to visualizing myeloarchitecture, but the image contrast is insufficient for delineation of cytoarchitecture. Spatial Light Interference Microscopy (SLIM) is a quantitative imaging technique (QPI)[20], capable of visualizing cytoarchitecture and myeloarchitecture without the use of exogenous labels in a non-contact manner. Conventional light microscopies such as Zernike phase contrast microscopy, and differential interference contrast (DIC) microscopy have been used to see the structure of neurons as well, but the images are qualitative, i.e., they do not render the pathlength map quantitatively. We characterize the gross architecture of brain by analyzing the tissue scattering property, namely, the mean free path

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