Abstract

Keratinous ‘soft tissue’ structures (i.e. epidermally derived and originally non-biomineralized), include feathers, skin, claws, beaks, and hair. Despite their relatively common occurrence in the fossil record (second only to bone and teeth), few studies have addressed natural degradation processes that must occur in all organic material, including those keratinous structures that are incorporated into the rock record as fossils. Because feathers have high preservation potential and strong phylogenetic signal, in the current study we examine feathers subjected to different burial environments for a duration of ~10 years, using transmission electron microscopy (TEM) and in situ immunofluorescence (IF). We use morphology and persistence of specific immunoreactivity as indicators of preservation at the molecular and microstructural levels. We show that feather keratin is durable, demonstrates structural and microstructural integrity, and retains epitopes suitable for specific antibody recognition in even the harshest conditions. These data support the hypothesis that keratin antibody reactivity can be used to identify the nature and composition of epidermal structures in the rock record, and to address evolutionary questions by distinguishing between alpha- (widely distributed) and beta- (limited to sauropsids) keratin.

Highlights

  • Beta-keratins are structural proteins expressed in the epidermis and epidermally derived structures of extant ‘reptiles’ and birds [1,2,3]

  • Degradation, or alteration of color or morphology was observed in control feathers kept covered at room temperature (Fig 1A and 1B)

  • In this long term study, we examined the microstructural and molecular preservation of modern feathers subjected to varying conditions, including high heat which has been suggested as a proxy for time (e.g. [27,28,29,30]), to directly test the stability of these materials

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Summary

Introduction

Beta-keratins are structural proteins expressed in the epidermis and epidermally derived structures of extant ‘reptiles’ and birds (sauropsids) [1,2,3]. Beta-keratin proteins are comprised of a high percentage of cysteine, a sulfur-containing amino acid. Cysteine readily forms disulfide bonds, which confer rigidity [4,5] and provide enhanced resistance to degradation. Beta-keratins incorporate multiple hydrophobic residues in their primary structure which exclude water [6], one of the primary effectors of early degradation of proteins [7]. Beta-keratin makes up 80–90% of a mature feather [8,9]. Some researchers suggest feather beta-keratin is a corneous beta protein [4,10,11], but because the majority of researchers still refer to this family of proteins as beta-keratins we employ the more common term in this manuscript

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