Isolation and molecular identification of Escherichia coli strain from fish available in farms and local markets in Nineveh governorate, Iraq

Abstract

This research work was conducted as well as the determination of the resistance to antibiotics of these isolated species of E. coli in Nineveh governorate to assess the incidence of Escherichia coli (E. coli) contamination in different fish farms and local fish markets. The total number of fish samples used in the present study was 153, including 75 samples from various fish farms and 78 samples from different local markets in Mosul. The current study showed that the percentage of E. coli isolated from fish farms was 24% (18/75) and 35.9% (28/78) from local markets. While it showed a positive result for E. coli with serotype (O157:H7) with a percentage was 9.3 and 14.1% from both farmed fish and market fish samples, respectively. Additionally, all E. coli positive isolates possess the specific uidA gene, which was detected using the PCR technique. The highest sensitivity of E. coli bacteria to the antibiotic’s ciprofloxacin, trimethoprim, and gentamicin was 96, 94, and 86%, respectively. At the same time, the highest percentage of resistance of E. coli to the antibiotics cephalothin, tetracycline, erythromycin, and amoxicillin was 100, 64, 64, and 62%, respectively. To reduce health risks to consumers, these results provide useful basic information for the proper management of these environments in order to prevent fecal contamination in fish farms and the fish sold in local markets.