Abstract

Can two sites of positive electrostatic potential localized on the outer surfaces of two halogen atoms (and especially fluorine) in different molecular domains attract each other to form a non-covalent engagement? The answer, perhaps counterintuitive, is yes as shown here using the electronic structures and binding energies of the interactions for a series of 22 binary complexes formed between identical or different atomic domains in similar or related halogen-substituted molecules containing fluorine. These were obtained using various computational approaches, including density functional and ab initio first-principles theories with M06-2X, RHF, MP2 and CCSD(T). The physical chemistry of non-covalent bonding interactions in these complexes was explored using both Quantum Theory of Atoms in Molecules and Symmetry Adapted Perturbation Theories. The surface reactivity of the 17 monomers was examined using the Molecular Electrostatic Surface Potential approach. We have demonstrated inter alia that the dispersion term, the significance of which is not always appreciated, which emerges either from an energy decomposition analysis, or from a correlated calculation, plays a structure-determining role, although other contributions arising from electrostatic, exchange-repulsion and polarization effects are also important. The 0.0010 a.u. isodensity envelope, often used for mapping the electrostatic potential is found to provide incorrect information about the complete nature of the surface reactive sites on some of the isolated monomers, and can lead to a misinterpretation of the results obtained.

Highlights

  • The halogens in Group 17 of the periodic table [1], when covalently bound in molecules, can accept and donate halogen bonds; the latter phenomenon has been called halogen bonding, or X-bonding, or XBs [2,3,4,5,6,7]

  • The interaction energies for the complexes quantitatively differ on passing from one level of theory to the other, this is not unexpected given that the extent of correlation and exchange effects are differently incorporated in RHF, M06-2X, MP2, CCSD(T) and SAPT

  • The 0.0010 a.u. envelope on which to compute the electrostatic potential is arbitrary, and its use may mislead when attempting to explore the complete nature of the reactivity of the fluorine in some of the molecules examined

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Summary

Introduction

The halogens in Group 17 of the periodic table [1], when covalently bound in molecules, can accept and donate halogen bonds; the latter phenomenon has been called halogen bonding, or X-bonding, or XBs [2,3,4,5,6,7]. Much effort has been made to demonstrate the role of halogen bonding in the design of engineered crystals [7], polymers, in biological systems, and molecular drugs [8]. It has been concluded that the heavier halogens (X=Cl, Br, I) in molecules are readily polarizable. They are dispersive and can form halogen bonds with negative sites [2,3,4].

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