Abstract

BackgroundThe Hepatitis Delta Virus (HDV) can increase the incidence of fulminant hepatitis. For this infection occurs, the host must also be infected with Hepatitis B Virus. Previous studies demonstrated the endemicity and near exclusivity of this infection in the Amazon region, and as a consequence of the difficulty in accessing this area we used dried blood spots (DBS) in sample collection. The aims of this study were to investigate the presence of recombination, to analyze the epidemiology, ancestry and evolutionary pressures on HDV in Brazil.MethodsBlood samples from 50 individuals were collected using dried-blood spots (DBS 903, Whatman), and sent via regular mail to Retrovirology Laboratory from Federal University of São Paulo, where the samples were processed. In the analysis the following software were used: PhyML, RDP, BEAST, jModelTest and CODEML.ResultsOur results confirm the prevalence of HDV-3 in the Amazon region of Brazil, with the absence of inter-genotypic recombination. It was identified a positive selection in probable epitopes of HDV on B lymphocytes that might indicate that the virus is changing to escape the humoral response of the host. The analysis of the time of the most common ancestor demonstrated the exponential growth of this virus in late 1970s that lasted until 1995, after which it remained constant. It was also observed a probable founder effect in two cities, which demonstrate the need to focus on prevention methods against HBV/HDV infection.ConclusionWe confirmed the prevalence of HDV-3 in the Amazon region of Brazil, without inter-genotypic recombination. The analysis of the time of the most common ancestor showed that this infection remain constant in the studied area. Taking into account the probable founder effect established in the cities of Rio Branco and Porto Velho, a focus on preventive methods is recommended against these infections.

Highlights

  • The Hepatitis Delta Virus (HDV) can increase the incidence of fulminant hepatitis

  • The samples belong to genotype 3, they formed two groups: one composed of isolates from Yucpa Indians in Venezuela [43] and another composed of Brazilian isolates plus one isolate from the Yavari River in the Amazon basin close to the Peru Brazil border [19]

  • Our results confirm the prevalence of HDV-3 in the Amazon region of Brazil

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Summary

Introduction

The Hepatitis Delta Virus (HDV) can increase the incidence of fulminant hepatitis For this infection occurs, the host must be infected with Hepatitis B Virus. The Northern region of Brazil has locations that are geographically isolated, which hinders the samples transportation until the processing laboratory. Thereat, it is used the HDV is the only subviral satellite agent known to infect humans. This virus requires the protection provided by the envelope of the Hepatitis B Virus (HBV) to enable its budding process from infected cells. Hepatitis delta occurs only in patients previously infected with HBV [7]

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