Inverse hexagonal phase of poly-unsaturated monogalactolipid: A computer model and analysis

Abstract

Monogalactosylodiacylglycerol (MGDG) is the main lipid component of thylakoid membranes. In water, MGDG molecules pack preferentially in the hexagonal HII phase, which consists of water-filled lipid cylinders arranged in a hexagonal lattice. The HII phase can also form in the thylakoid membrane where it plays a key role in the photoprotection of the photosynthetic apparatus. In this study an all-atom computer model of the 16-cylinder MGDG HII phase was generated in a 3-μs molecular dynamics simulation and mathematical tools were developed to analyse its structural properties. The model-predicted values of the basic structural parameters, namely hexagonal spacing, circular and effective radii of the water channel, surface area/MGDG, and order parameters for the MGDG acyl chains, were compared with the experimental data available in the literature to validate the model. A stable computer model of the MGDG HII phase and the tools developed may serve further numerical experiments and investigations into the role of this phase in biological processes.