Abstract
The Mindboggle project was initiated to improve the labeling as well as morphometry of brain imaging data, and to promote open science by making all data, software, and documentation freely and openly available. An interface for interactive visualization is essential for assessing issues in brain image processing and analysis, including surface reconstruction, labeling, and morphometry. We completed an initial version of our browser-based interactive visualization tool; a left hemisphere of a human brain is available at http://roygbiv.mindboggle.info.
Highlights
Our goal for the hackathon was to create an interactive Web browser application to visualize human brain image data processed by the Mindboggle software package (Klein and Hirsch 2005, Klein et al 2017)
An interface for interactive visualization is essential for assessing issues in brain image processing and analysis, including surface reconstruction, labeling, and morphometry
Mindboggle processes human brain cortical surface meshes in the VTK format, and generates label and shape information for each anatomical region, where labels follow the Desikan-KillianyTourville protocol (Klein and Tourville 2012)
Summary
Our goal for the hackathon was to create an interactive Web browser application to visualize human brain image data processed by the Mindboggle software package (Klein and Hirsch 2005, Klein et al 2017). The Mindboggle project was initiated to improve the labeling as well as morphometry of brain imaging data, and to promote open science by making all data, software, and documentation freely and openly available. An interface for interactive visualization is essential for assessing issues in brain image processing and analysis, including surface reconstruction, labeling, and morphometry.
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