Abstract

Interactions of three neurotrophin dimers, brain-derived neurotrophic factor (BDNF), neurotrophin-3 (NT-3), and a NT-3.BDNF heterodimer with extracellular, soluble TrkB and TrkC receptors were studied using native gels, light scattering, and sedimentation equilibrium. These three neurotrophins showed binding of two TrkB receptors per neurotrophin dimer, with a tendency to dissociate into one TrkB per dimer for NT-3 and the heterodimer, as determined by native gels, light scattering, and sedimentation equilibrium. For TrkC, native gels suggested binding of NT-3, heterodimer, and BDNF but not of nerve growth factor. Sedimentation equilibrium revealed that all three neurotrophin molecules bind to TrkC at two receptors per dimer but that BDNF binds much more weakly and that the heterodimer has an intermediate binding strength. Light scattering/size exclusion chromatography showed complexes with two TrkC receptors per NT-3 dimer and one TrkC per heterodimer but did not detect binding of BDNF to TrkC. This latter result is not inconsistent with the sedimentation data, because the weak binding of BDNF to TrkC may be easily dissociated by nonspecific interactions of BDNF with the size exclusion column. The relative binding constants for these neurotrophins and the soluble receptor extracellular domains, as determined by sedimentation equilibrium, are correlated with their biological activity. However, the magnitude of these binding constants is insufficient by approximately 3 orders of magnitude to promote receptor dimerization at physiologically active concentrations.

Highlights

  • Interactions of three neurotrophin dimers, brain- NGFB, DNF, and NT-3 form a stronglyassociatinghoderived neurotrophic factor (BDNF), neurotrophin-3 modimer(Angletti et d, 1971;BothwellandShooter,1977;

  • TrkB receptors per neurotrophin dimer, witha tendency al., 1982) are dimers, and for these molecules receptor to dissociate into one TrkB per dimer for NT-3 and the heterodimer,as determined by native gels, light scattering, and sedimentation equilibrium

  • For TrkC, native gels suggestedbinding of NT-3, heterodimer, and BDNF but not of nerve growth factor

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Summary

EXPERIMENTAL PROCEDURES

Materials-BDNF and NT-3 were prepared from insoluble fractions of Escherichia coli lysates using a series of chromatographicprocedures following oxidation and refolding steps. The abbreviationsused are: NGF, nerve growth factor;BDNF, brainderived neurotrophic factor; NT-3, neurotrophin-3; SEC, size exclusion ular weights (without carbohydrate contributions) were calculated using the signals from all three detectors and the appropriate extinction coefficient of the protein or complexat 280 nm, using methods we have describedpreviously (Arakawa et al, 1992, 1994a). To determine the total molecular weightand carbohydrate content of TrkB and TrkC from the sedimentation data we used a self-consistent treatment and our knowledge of the sequence molecular weights. With the measured value of Mb, the known protein molecular weight ( M J , and the calculated partial specific volumes,the only unknown in this equation is X , which can be solved for uniquely.This procedure is similar to that outlined by Shire (1992),except that here a direct algebraic solution is employed rather than iterative estimates.

TABLEI Estimated number of charged residues cPhNacorhsegiatgerivasgteivse
RESULTSAND DISCUSSION
Interaction of Neurotrwopithhins Dk Receptors
Thseituationisomewhat morceomplicated for the
2TrkC:BDNF dimer
Findings
PM subunits
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