Abstract
Long non-coding RNAs (LncRNAs) can bind to other proteins or RNAs to regulate gene expression, and its role in tumors has been extensively studied. A common RNA binding protein, UPF1, is also a key factor in a variety of RNA decay pathways. RNA decay pathways serve to control levels of particular RNA molecules. The expression of UPF1 is often dysregulated in tumors, an observation which suggests that UPF1 contributes to development of a variety of tumors. Herein, we review evidence from studies of fourteen lncRNAs interact with UPF1. The interaction between lncRNA and UPFI provide fundamental basis for cell transformation and tumorigenic growth.
Highlights
About 93% of the human genome is transcribed into RNA
There are three possible mechanisms for cis action: (1) lncRNA recruits transcription factors to a locus to regulate the expression of a nearby gene (Figure 1A); (2) regulation of nearby genes during lncRNA transcription and shearing (Figure 1B); and (3) regulation of nearby genes by the lncRNA promoter or original DNA of the locus (Figure 1C; Ma et al, 2013; Kopp and Mendell, 2018; Yao et al, 2019)
The lncRNA GAS5 interacts with the WW domain of the YAP protein in colorectal cancer, and promotes the degradation of Yes1-related transcriptional regulators (YAP) through the ubiquitin-proteasome pathway (Ni et al, 2019)
Summary
About 93% of the human genome is transcribed into RNA. Protein-coding genes account for only about 2% of RNAs, with the vast majority of transcripts being non-coding RNAs (ncRNAs) (Qian et al, 2019). The lncRNA GAS5 interacts with the WW domain of the YAP protein in colorectal cancer, and promotes the degradation of Yes1-related transcriptional regulators (YAP) through the ubiquitin-proteasome pathway (Ni et al, 2019). LncRNAs Bind UPF1 and Affect the Stability of mRNA
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