Abstract

This study describes the development of a system that calculates the fluxes of a metabolic network. It integrates several open source software tools in order to simulate the behaviour of specific metabolic pathways using Flux Balance Analysis (FBA). This tool receives as input the stoichiometry, the thermodynamic and capacity constraints of the metabolic network, and also an objective function.

Highlights

  • phlettmpe:/n/wt>wmcBeniotSrayls.Bcoiom: /Bcioonintefonrtm/padtfi/c1s4a7n1d-2S1y0s5te-6m-Ss3B-ionflo.gpydCfre Meeting abstracts – A single PDF containing all abstracts in this Supplement is available here.

  • This study describes the development of a system that calculates the fluxes of a metabolic network

  • It integrates several open source software tools in order to simulate the behaviour of specific metabolic pathways using Flux Balance Analysis (FBA)

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Summary

Introduction

phlettmpe:/n/wt>wmcBeniotSrayls.Bcoiom: /Bcioonintefonrtm/padtfi/c1s4a7n1d-2S1y0s5te-6m-Ss3B-ionflo.gpydCfre Meeting abstracts – A single PDF containing all abstracts in this Supplement is available here.. Email: Ana Sofia Figueiredo* - sofiafig@igc.gulbenkian.pt * Corresponding author from BioSysBio: Bioinformatics and Systems Biology Conference Edinburgh, UK, 14–15 July 2005

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