Abstract

The placenta is a temporary but pivotal organ for human pregnancy. It consists of multiple specialized trophoblast cell types originating from the trophectoderm of the blastocyst stage of the embryo. While impaired trophoblast differentiation results in pregnancy disorders affecting both mother and fetus, the molecular mechanisms underlying early human placenta development have been poorly understood, partially due to the limited access to developing human placentas and the lack of suitable human in vitro trophoblast models. Recent success in establishing human trophoblast stem cells and other human in vitro trophoblast models with their differentiation protocols into more specialized cell types, such as syncytiotrophoblast and extravillous trophoblast, has provided a tremendous opportunity to understand early human placenta development. Unfortunately, while high-throughput research methods and omics tools have addressed numerous molecular-level questions in various research fields, these tools have not been widely applied to the above-mentioned human trophoblast models. This review aims to provide an overview of various omics approaches that can be utilized in the study of human in vitro placenta models by exemplifying some important lessons obtained from omics studies of mouse model systems and introducing recently available human in vitro trophoblast model systems. We also highlight some key unknown questions that might be addressed by such techniques. Integrating high-throughput omics approaches and human in vitro model systems will facilitate our understanding of molecular-level regulatory mechanisms underlying early human placenta development as well as placenta-associated complications.

Highlights

  • As a transient but multifunctional organ essential for the proper development of the fetus in placental mammals, the placenta plays a central role in multiple processes during pregnancy, such as gas and nutrient exchange, hormone production, and immunological protection (Rossant and Cross, 2001)

  • Since most studies have been performed in Mouse TSCs (mTSCs), the vast majority of data we reviewed here are from mouse studies, with occasional studies from human trophoblast and the placenta

  • We review some important omics approaches, such as chromatin immunoprecipitation coupled with high-throughput sequencing (ChIP-seq), transposase-accessible chromatin followed by sequencing (ATAC-seq), high-throughputpromotercapture (Hi-C), and other approaches mainly taken in mTSCs or other contexts

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Summary

Introduction

As a transient but multifunctional organ essential for the proper development of the fetus in placental mammals, the placenta plays a central role in multiple processes during pregnancy, such as gas and nutrient exchange, hormone production, and immunological protection (Rossant and Cross, 2001). Despite these important roles, the placenta has not received sufficient attention, remaining one of the least studied organs in the body (Cao and Fleming, 2016). The etiologies of pregnancy disorders are often multifactorial, prior research has suggested a direct link between the defect in trophoblast differentiation and pregnancy-related complications, such as PE and intrauterine growth restriction (IUGR) (Chen et al, 2002; Ergaz et al, 2005; Uzan et al, 2011)

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