Influence of historical inundation frequency on soil microbes (Cyanobacteria, Proteobacteria, Actinobacteria) in semi-arid floodplain wetlands

Abstract

Cyanobacteria and other microbes are important moderators of biogeochemical processes in semi-arid floodplain wetlands with varying inundation regimes. Inundation is a key environmental driver for floodplain biological communities. Little is known about the effect of historical inundation frequency on the spatial abundance of floodplain–wetland Cyanobacteria and other microbes. In this study, soil samples were collected at two locations with a gradient of low-to-high inundation frequency in the Macquarie Marshes, south-east Australia. We used high-throughput sequencing to estimate the proportional abundance of the soil Cyanobacteria and other dominant microbes, targeting the bacterial 16S rRNA gene. Of the microbes recovered, Cyanobacteria constituted proportionally a minor component, relative to other dominant phyla like Proteobacteria and Actinobacteria. Linear regression (generalised least-squares) models accounting for spatial autocorrelation showed that historical inundation frequency had no significant effect on the proportional abundance of Cyanobacteria at both wetlands studied. However, inundation frequency had a significant positive effect on the proportional abundance of Proteobacteria and a significant negative effect on the proportional abundance of Actinobacteria. Cyanobacteria seem to occupy a different hydrological niche from Proteobacteria and Actinobacteria in semi-arid floodplain wetlands, suggesting taxon-dependent response of floodplain microbial communities to varying inundation regimes and associated soil conditions in those environments.