Abstract

Bilateral renal cell carcinomas (RCCs) pose a challenge for clinical treatment and management. Most bilateral RCCs are sporadic, and do not show a hereditary pattern indicative of VHL syndrome or other inherited cancers. The origin and evolution of these sporadic bilateral RCCs remains elusive. We obtained normal and tumor samples from two male patients suffering from early stage synchronous bilateral clear cell RCC (ccRCC), and analyzed genomic DNA using whole exome sequencing and bisulfite pyrosequencing. We detected distinct 3p loss of heterozygosity (LOH) in both tumors in each patient. Two tumors within the same patient harbored distinct driver mutations and different CpG hypermethylation sites in the VHL promoter. Moreover, tumors exhibit independent evolutionary trajectories. Therefore, distinct 3p LOH, combined with contingent driver gene mutations and independent VHL hypermethylation, led to independent tumor origin and parallel evolution of bilateral ccRCC in these two patients. Our results indicate that tumors in these two cases were not due to common germline oncogenic mutations. They were results of multiple de novo mutations in each kidney, rather than primary ccRCC with contralateral renal metastasis. Therefore, histopathologic and genetic profiling from single tumor specimen may underestimate the mutational burden and somatic heterogeneity of bilateral ccRCCs.

Highlights

  • Renal cell carcinoma (RCC) accounts for 2–3% of all adult malignancies[1,2]

  • Two male patients (BC_1 and BC_2) suffering from early stage synchronous bilateral clear cell RCC (ccRCC) were involved in this study (Supplementary Table 1 and Fig. 1)

  • Different CpG sites in the Von Hippel-Lindau (VHL) promoter region were hypermethylated in tumor samples from the same patients, indicating independent VHL promoter hypermethylation during tumorigenesis

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Summary

Introduction

Renal cell carcinoma (RCC) accounts for 2–3% of all adult malignancies[1,2]. RCC can be histologically classified into a few subtypes, and clear cell renal cell carcinoma (ccRCC) constitutes 70–80% of all RCCs1. Synchronous bilateral RCC (diagnosed concomitantly or within 6 months of the first primary tumor) was reported to occur in 0.3–2.6% RCC patients[3,5]. Most bilateral RCCs are sporadic, and do not show a hereditary pattern indicative of Von Hippel-Lindau (VHL) syndrome, hereditary papillary renal carcinoma, or other inherited cancer[3]. The majority of known events are frequently subclonal, while VHL mutation/hypermethylation and Chromosome 3p loss of heterozygosity (3p LOH) are the only consistently shared events in most ccRCCs9. Multiple renal cysts and carcinomas in both kidneys are common in patients with VHL syndrome. The majority of bilateral RCC patients are sporadic It remains to be elucidated whether a common germline mutation leads to the development of sporadic bilateral RCCs, or two tumors are completely independent. The aim of this study was to investigate the origin and evolution of synchronous bilateral ccRCC through whole exome sequencing (WES) and bisulfite pyrosequencing of samples from two such cases

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