Abstract

Ancestry Informative Markers InDels (AIM-InDels) show high allele frequency variation between ancestral populations and are useful to estimate individual and population ancestry. Our goal was to characterize the frequencies of 46 AIM-InDels in a population sample of 50 individuals from Barranquilla city, Atlantic Department in Colombia. The ancestral components were calculated according to the methodology described in [1]; using STRUCTURE v2.3.3 with a burnin length of 100,000 followed by 100,000 MCMC, with a K=3, considering the “Admixture Model” and correlated allele frequencies. As parental populations, the genetic profiles of 322 individuals (Africans: 105 Europeans: 158, Native Americans: 59) [1] and 42 Native American individuals [8] were used. The contribution of each founder population was estimated in: 24.7% of African, 27.6% of Native American and 47.7% of European. These findings reveal different admixture histories of the studied population, and generate reliable ancestry estimates useful to investigate association between ancestry and genetic complex disorders.

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