Indapamide analogue a promising drug: Synthesis, a novel crystal structure, HSA/DFT/XRD, greener pastures biological study

Abstract

A new indoline derivative, N-allyl-4-chloro-3-(N,N-diallylsulfamoyl)-N-(2-methylindolin-1-yl)benzamide (ASIB), indapamide analogue, has been synthesized via the N-allylation reaction and characterized by ESI-MS, IR, 1H & 13C NMR. The geometric parameters of the title compound, whose crystallographic structure has been defined by X-ray diffraction, have been calculated by Density Functional Theory (DFT), B3LYP, 6–311++G(d,p) basis set. For these operations, the data obtained by X-ray diffraction was used as initial values, and the calculated geometric parameters and experimental results were compared. In order to understand intermolecular interactions, Molecular Electrostatic Potential (MEP) and Hirshfeld Surface Analysis (HSA) studies were figured out for the molecule. Frontier Molecular Orbitals (FMO's) were created, and Energy Gap between Lowest Unoccupied Molecular Orbital (LUMO) and Highest Occupied Molecular Orbital (HOMO) was calcculated. Adapting Greener Pastures Biological Study (GPBS) aims to conduct a fair comparative study using accessible computer-aided software. ASIB, Indapamide, Asunaprevir, Danoprevir, and Vaniprevir were docked together using the same conditions and parameters to ensure a fair comparison. The binding scores against 6LU7 were −6.6, −7.1, −8.4, 7.6, and −7.9 kcal/mol−1 for ASIB, Indapamide, Asunaprevir, Danoprevir, and Vaniprevir, respectively. A relation between the molecule's binding score was due to the hydrophobic and hydrogen interactions between the ligand and the receptor's active amino acid residues. Worth pointing out here that the free energy and environmentally friendly in Silico molecular docking method aims mainly to rank ASIB, and Indapamide with respect to the approved drugs used in this study. Results support further investigation of ASIB as non-toxic a Diuretic, anti-COVID-19 and powerful antiviral drug as an indapamide derivative. Way2drug-PASS, Pro Tox-II and SwissADME are online software tools used in this study. Absorption, distribution, metabolism, excretion and toxicity (ADMET) properties of ASIB and its starting material (Indapamide) were compared.